RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 RNF111Q6ZNA4 994 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 OR52R1Q8NGF1 315 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 C16orf52Q8NHV5 167 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 BRIX1Q8TDN6 353 aaKnown RBP18.52■□□□□ 0.56
ACTB-210ENST00000477812 FAM120BQ96EK7 910 aaKnown RBP18.52■□□□□ 0.56
ACTB-210ENST00000477812 THOC3Q96J01 351 aaKnown RBP18.52■□□□□ 0.56
ACTB-210ENST00000477812 NPAS2Q99743 824 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 CCDC106Q9BWC9 280 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 LHPPQ9H008 270 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 DTX4Q9Y2E6 619 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 CAPN7Q9Y6W3 813 aa18.52■□□□□ 0.56
ACTB-210ENST00000477812 NUP214P35658 2090 aaPredicted RBP18.51■□□□□ 0.55
ACTB-210ENST00000477812 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 A0A1W2PP18 115 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 DYTNA2CJ06 578 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 CCDC154A6NI56 674 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 PRAMEF2O60811 474 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 ITGA3P26006 1051 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 GPC1P35052 558 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 SOX11P35716 441 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 CDKN2CP42773 168 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 LRRC74AQ0VAA2 488 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 MYBPC3Q14896 1274 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 COL28A1Q2UY09 1125 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 SLC2A7Q6PXP3 512 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 HSDL2Q6YN16 418 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 TREML1Q86YW5 311 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 ZNF441Q8N8Z8 693 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 VPS37AQ8NEZ2 397 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 OR4A15Q8NGL6 344 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 NUBPLQ8TB37 319 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 BCAS4Q8TDM0 211 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 GTF2H4Q92759 462 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 HOXB13Q92826 284 aaPredicted RBP18.51■□□□□ 0.55
ACTB-210ENST00000477812 GIMAP5Q96F15 307 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 SLC6A13Q9NSD5 602 aa18.51■□□□□ 0.55
ACTB-210ENST00000477812 DDX18Q9NVP1 670 aaKnown RBP18.51■□□□□ 0.55
ACTB-210ENST00000477812 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.51■□□□□ 0.552e-13■□□□□ 11
ACTB-210ENST00000477812 CAPN14A8MX76 684 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 NDUFAB1O14561 156 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 MAN1A2O60476 641 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 NME6O75414 186 aaPredicted RBP18.5■□□□□ 0.55
ACTB-210ENST00000477812 ABCB1P08183 1280 aaPredicted RBP18.5■□□□□ 0.55
ACTB-210ENST00000477812 SNRPB2P08579 225 aaKnown RBP18.5■□□□□ 0.55
ACTB-210ENST00000477812 PAGE3Q5JUK9 113 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 EXOSC6Q5RKV6 272 aaKnown RBP18.5■□□□□ 0.55
ACTB-210ENST00000477812 C19orf48Q6RUI8 117 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 GPR155Q7Z3F1 870 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 RETREG3Q86VR2 466 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 CCDC197Q8NCU1 140 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 FDCSPQ8NFU4 85 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 SFXN5Q8TD22 340 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 EXTL1Q92935 676 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 ITCHQ96J02 903 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 VSTM2LQ96N03 204 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 WWTR1Q9GZV5 400 aa18.5■□□□□ 0.55
ACTB-210ENST00000477812 HEMK1Q9Y5R4 338 aaPredicted RBP18.5■□□□□ 0.55
ACTB-210ENST00000477812 A6NL46 340 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 FBP2O00757 339 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 EMC8O43402 210 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 BCAS2O75934 225 aaPredicted RBP18.49■□□□□ 0.55
ACTB-210ENST00000477812 ZFAND5O76080 213 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 CCL11P51671 97 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 MAPKAPK3Q16644 382 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 FAM91A1Q658Y4 838 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 B3GNTL1Q67FW5 361 aaPredicted RBP18.49■□□□□ 0.55
ACTB-210ENST00000477812 LGI4Q8N135 537 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 CLEC4FQ8N1N0 589 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 SIRT6Q8N6T7 355 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 TTC9Q92623 222 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 ADIPOR1Q96A54 375 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 MS4A4EQ96PG1 132 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 PHF12Q96QT6 1004 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 PANX1Q96RD7 426 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 DEFB126Q9BYW3 111 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 PAIP1Q9H074 479 aaKnown RBP18.49■□□□□ 0.55
ACTB-210ENST00000477812 EPS8L2Q9H6S3 715 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 ZNF552Q9H707 407 aaPredicted RBP18.49■□□□□ 0.55
ACTB-210ENST00000477812 RMND5AQ9H871 391 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 GPATCH2Q9NW75 528 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 GPR83Q9NYM4 423 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 BCAP29Q9UHQ4 241 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 SNX8Q9Y5X2 465 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 ATMQ13315 3056 aa18.49■□□□□ 0.55
ACTB-210ENST00000477812 CPAMD8Q8IZJ3 1885 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 RFXANKO14593 260 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 COQ9O75208 318 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 DCTN3O75935 186 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 CPSF4O95639 269 aaKnown RBP18.48■□□□□ 0.55
ACTB-210ENST00000477812 C1QCP02747 245 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 ZCCHC18P0CG32 403 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 MAP3K8P41279 467 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 TRPC1P48995 793 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 CCT3P49368 545 aaKnown RBP18.48■□□□□ 0.55
ACTB-210ENST00000477812 POLE2P56282 527 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 RAPSNQ13702 412 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 LINC00303Q3SY05 128 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 LRIF1Q5T3J3 769 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 FCRLBQ6BAA4 426 aa18.48■□□□□ 0.55
ACTB-210ENST00000477812 TCTN3Q6NUS6 607 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms