RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 MAPRE2Q15555 327 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 SPDYE7PQ495Y7 208 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 IRAK1BP1Q5VVH5 260 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 KIF2BQ8N4N8 673 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 M1APQ8TC57 530 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 CTHRC1Q96CG8 243 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 SENP5Q96HI0 755 aaPredicted RBP14.25□□□□□ -0.13
SEC13-215ENST00000477547 CCDC115Q96NT0 180 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 TRIM4Q9C037 500 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 ING2Q9H160 280 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 RMND5AQ9H871 391 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 ANKRA2Q9H9E1 313 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 ATP13A2Q9NQ11 1180 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 SIRT3Q9NTG7 399 aaPredicted RBP14.25□□□□□ -0.13
SEC13-215ENST00000477547 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.25□□□□□ -0.13
SEC13-215ENST00000477547 BCAP29Q9UHQ4 241 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 BTNL2Q9UIR0 455 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 ZNF223Q9UK11 482 aaPredicted RBP14.25□□□□□ -0.13
SEC13-215ENST00000477547 PCDHGB4Q9UN71 923 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 SNX8Q9Y5X2 465 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 KCNMB2Q9Y691 235 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 PIEZO2Q9H5I5 2752 aa14.25□□□□□ -0.13
SEC13-215ENST00000477547 PTPN13Q12923 2485 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 A0A087WV62 115 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 DYTNA2CJ06 578 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 ASPDHA6ND91 283 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 PLOD3O60568 738 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 COQ9O75208 318 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 DNAJB5O75953 348 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 CPSF4O95639 269 aaKnown RBP14.24□□□□□ -0.13
SEC13-215ENST00000477547 CBX7O95931 251 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 CLPSP04118 112 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 IFI6P09912 130 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 ITGAMP11215 1152 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 CD1EP15812 388 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 ADSLP30566 484 aaPredicted RBP14.24□□□□□ -0.13
SEC13-215ENST00000477547 SOX18P35713 384 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 LRRC74AQ0VAA2 488 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 FUT7Q11130 342 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 ZNF155Q12901 538 aaPredicted RBP14.24□□□□□ -0.13
SEC13-215ENST00000477547 GAB1Q13480 694 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 VPS26BQ4G0F5 336 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 TRMT12Q53H54 448 aaKnown RBP14.24□□□□□ -0.13
SEC13-215ENST00000477547 C6orf10Q5SRN2 563 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 FHL5Q5TD97 284 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 SLC2A7Q6PXP3 512 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 PRICKLE2Q7Z3G6 844 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 SNX32Q86XE0 403 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 ANKS4BQ8N8V4 417 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 OR7G1Q8NGA0 311 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 OR52R1Q8NGF1 315 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 SNRNP27Q8WVK2 155 aaKnown RBP14.24□□□□□ -0.13
SEC13-215ENST00000477547 ERP27Q96DN0 273 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 ELP4Q96EB1 424 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 THOC3Q96J01 351 aaKnown RBP14.24□□□□□ -0.13
SEC13-215ENST00000477547 MAGED4Q96JG8 741 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 MS4A4EQ96PG1 132 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 PANX1Q96RD7 426 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 GAL3ST4Q96RP7 486 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 MYLK2Q9H1R3 596 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 OR10A5Q9H207 317 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 CXorf36Q9H7Y0 433 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 ZCCHC3Q9NUD5 404 aaKnown RBP14.24□□□□□ -0.13
SEC13-215ENST00000477547 TAS2R9Q9NYW1 312 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 PTGFRNQ9P2B2 879 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 ZNF639Q9UID6 485 aa14.24□□□□□ -0.13
SEC13-215ENST00000477547 RNF103-CHMP3A0A140T963 221 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 PLOD2O00469 737 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 RFXANKO14593 260 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 ANGPT2O15123 496 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 SNRPB2P08579 225 aaKnown RBP14.23□□□□□ -0.13
SEC13-215ENST00000477547 GPR143P51810 404 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 SLC37A1P57057 533 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 PRR5P85299 388 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 DUSP8Q13202 625 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 MAPKAPK3Q16644 382 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 BORAQ6PGQ7 559 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 TMEM64Q6YI46 380 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 HSDL2Q6YN16 418 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 SLC29A4Q7RTT9 530 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 APLFQ8IW19 511 aaPredicted RBP14.23□□□□□ -0.13
SEC13-215ENST00000477547 C9orf40Q8IXQ3 194 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 OR2L13Q8N349 312 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 GALNT16Q8N428 558 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 SIMC1Q8NDZ2 872 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 OR5AK3PQ8NH89 298 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 PSMA8Q8TAA3 256 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 SFXN5Q8TD22 340 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 BRIX1Q8TDN6 353 aaKnown RBP14.23□□□□□ -0.13
SEC13-215ENST00000477547 ELP5Q8TE02 316 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 APOBEC4Q8WW27 367 aaKnown RBP14.23□□□□□ -0.13
SEC13-215ENST00000477547 FAM120BQ96EK7 910 aaKnown RBP14.23□□□□□ -0.13
SEC13-215ENST00000477547 ITCHQ96J02 903 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 INPP5KQ9BT40 448 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 SLC25A23Q9BV35 468 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 DEFB126Q9BYW3 111 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 LHPPQ9H008 270 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 C3orf14Q9HBI5 128 aa14.23□□□□□ -0.13
SEC13-215ENST00000477547 LEF1Q9UJU2 399 aaPredicted RBP14.23□□□□□ -0.13
SEC13-215ENST00000477547 A0A1W2PP18 115 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms