RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	SULT1A4	P0DMN0	295 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	ERVK-10	P10266	1014 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	AR	P10275	920 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	CYBA	P13498	195 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PRG2	P13727	222 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	AKR1A1	P14550	325 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PVALB	P20472	110 aa	Predicted RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	UBA1	P22314	1058 aa	Known RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	ITGB8	P26012	769 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	SLC6A4	P31645	630 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PMEL	P40967	661 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF81	P51508	661 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	P2RY4	P51582	365 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	JAK3	P52333	1124 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	EPHA5	P54756	1037 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	CDH4	P55283	916 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	STARD6	P59095	220 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	TAS2R60	P59551	318 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	GMFB	P60983	142 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	RAP2B	P61225	183 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	E2F1	Q01094	437 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PIGF	Q07326	219 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	ILF3	Q12906	894 aa	Known RBP eCLIP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	MLLT11	Q13015	90 aa	Predicted RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PLD1	Q13393	1074 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	CAMK2D	Q13557	499 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	KRT33B	Q14525	404 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	GBX1	Q14549	363 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	MXD4	Q14582	209 aa	Predicted RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	GRM3	Q14832	879 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	TRAM2	Q15035	370 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	TAF1A	Q15573	450 aa	Predicted RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	CHRNA6	Q15825	494 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	CCL14	Q16627	93 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZNF284	Q2VY69	593 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	UAP1L1	Q3KQV9	507 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	DUSP28	Q4G0W2	176 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	ARHGAP15	Q53QZ3	475 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	SPIN4	Q56A73	249 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PCID2	Q5JVF3	399 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	DHRS7B	Q6IAN0	325 aa	Predicted RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR4F3	Q6IEY1	312 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR2T5	Q6IEZ7	315 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	TCEAL6	Q6IPX3	200 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	RPL13AP3	Q6NVV1	102 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	TAPT1	Q6NXT6	567 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM180B	Q6P0A1	224 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAHD1	Q6P587	224 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	POMZP3	Q6PJE2	187 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	METTL7B	Q6UX53	244 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	BAIAP2L2	Q6UXY1	529 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	UNC5D	Q6UXZ4	953 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	MSANTD1	Q6ZTZ1	278 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	TMPRSS9	Q7Z410	1059 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	IFNE	Q86WN2	208 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	ZFAND4	Q86XD8	727 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	XYLT1	Q86Y38	959 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PHYKPL	Q8IUZ5	450 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	FBXO16	Q8IX29	292 aa	Predicted RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	KLHDC8B	Q8IXV7	354 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	CMIP	Q8IY22	773 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520		Q8N402	240 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PQLC3	Q8N755	202 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	KREMEN2	Q8NCW0	462 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR8D4	Q8NGM9	314 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR2T29	Q8NH02	315 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PCDH19	Q8TAB3	1148 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	RHEBL1	Q8TAI7	183 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	DNAJB14	Q8TBM8	379 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	GLYATL2	Q8WU03	294 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	TCTEX1D2	Q8WW35	142 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	SELENOM	Q8WWX9	145 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	KCNJ9	Q92806	393 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	FAM162A	Q96A26	154 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	RFT1	Q96AA3	541 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	VOPP1	Q96AW1	172 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	RNF31	Q96EP0	1072 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	NARS2	Q96I59	477 aa	Known RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	FCRL1	Q96LA6	429 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PPP1R36	Q96LQ0	422 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	LURAP1	Q96LR2	239 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	C3orf30	Q96M34	536 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	HS6ST2	Q96MM7	605 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	LINC00052	Q96N35	136 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	TSGA13	Q96PP4	275 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	KCNS3	Q9BQ31	491 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	CCM2	Q9BSQ5	444 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	DPH7	Q9BTV6	452 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PAPOLG	Q9BWT3	736 aa	Known RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	BCL2L14	Q9BZR8	327 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	KATNBL1	Q9H079	304 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	BTBD1	Q9H0C5	482 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	OR51E2	Q9H255	320 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	RIBC2	Q9H4K1	309 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	GSTO2	Q9H4Y5	243 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	PPP1R3E	Q9H7J1	279 aa		4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	DDX31	Q9H8H2	851 aa	Known RBP	4.46	□□□□□ -1.7
PTCD3-212	ENST00000477520	SEBOX	Q9HB31	216 aa	Predicted RBP	4.46	□□□□□ -1.7

Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms