RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 EHD3Q9NZN3 535 aa8.84□□□□□ -0.99
COL4A5-204ENST00000477429 FETUBQ9UGM5 382 aa8.84□□□□□ -0.99
COL4A5-204ENST00000477429 PTBP2Q9UKA9 531 aaKnown RBP8.84□□□□□ -0.99
COL4A5-204ENST00000477429 FBXL2Q9UKC9 423 aa8.84□□□□□ -0.99
COL4A5-204ENST00000477429 PACSIN3Q9UKS6 424 aa8.84□□□□□ -0.99
COL4A5-204ENST00000477429 MTO1Q9Y2Z2 717 aaKnown RBP8.84□□□□□ -0.99
COL4A5-204ENST00000477429 CR1P17927 2039 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 A0A0A6YYD5 115 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 LRRC14BA6NHZ5 514 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 RNF223E7ERA6 249 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 H0Y3Z8 333 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 PLOD2O00469 737 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 CASKO14936 926 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 PHGDHO43175 533 aaKnown RBP8.83□□□□□ -1
COL4A5-204ENST00000477429 CCNT2O60583 730 aaKnown RBP8.83□□□□□ -1
COL4A5-204ENST00000477429 ICOSLGO75144 302 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 STK16O75716 305 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 SMNDC1O75940 238 aaKnown RBP eCLIP8.83□□□□□ -1
COL4A5-204ENST00000477429 SNX4O95219 450 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 GPR75O95800 540 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 AIFM1O95831 613 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 CGAP01215 116 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 CTAGE8P0CG41 777 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 GPX3P22352 226 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 GSTM2P28161 218 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 ABCD3P28288 659 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 BSGP35613 385 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 KIR2DL2P43627 348 aaPredicted RBP8.83□□□□□ -1
COL4A5-204ENST00000477429 SERPINB4P48594 390 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 B3GALT5-AS1P59052 145 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 SRSF2Q01130 221 aaKnown RBP8.83□□□□□ -1
COL4A5-204ENST00000477429 DUSP2Q05923 314 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 MGAT2Q10469 447 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 FUT7Q11130 342 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 TBL3Q12788 808 aaKnown RBP8.83□□□□□ -1
COL4A5-204ENST00000477429 DLG1Q12959 904 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 DDX39BQ13838 428 aaKnown RBP8.83□□□□□ -1
COL4A5-204ENST00000477429 RCN2Q14257 317 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 PDK4Q16654 411 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 AP5B1Q2VPB7 878 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 DEPDC1Q5TB30 811 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 FRA10AC1Q70Z53 315 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 CTAGE4Q8IX94 777 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 LAS2Q8IYD9 372 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 DND1Q8IYX4 353 aaKnown RBP8.83□□□□□ -1
COL4A5-204ENST00000477429 OR1J4Q8NGS1 313 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 ANKRD7Q92527 254 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 FIG4Q92562 907 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 EFCAB11Q9BUY7 163 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 OR2B2Q9GZK3 357 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 PITHD1Q9GZP4 211 aaPredicted RBP8.83□□□□□ -1
COL4A5-204ENST00000477429 ZNF701Q9NV72 531 aaPredicted RBP8.83□□□□□ -1
COL4A5-204ENST00000477429 ADGRE2Q9UHX3 823 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 TEX264Q9Y6I9 313 aa8.83□□□□□ -1
COL4A5-204ENST00000477429 A0A0G2JK05 382 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 SYNDIG1LA6NDD5 238 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 OR6C76A6NM76 312 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 CXorf49A8MYA2 514 aaPredicted RBP8.82□□□□□ -1
COL4A5-204ENST00000477429 DNALI1O14645 258 aaPredicted RBP8.82□□□□□ -1
COL4A5-204ENST00000477429 TP53I11O14683 189 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 KLF4O43474 513 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 HCRTR2O43614 444 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 OR10H2O60403 315 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 UGT2B11O75310 529 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 TTC4O95801 387 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 ACTL6AO96019 429 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 CD1DP15813 335 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 PAX1P15863 534 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 ZNF708P17019 499 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 UGT2B10P36537 528 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 CD79BP40259 229 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 RPS13P62277 151 aaKnown RBP8.82□□□□□ -1
COL4A5-204ENST00000477429 SIRPAP78324 504 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 IRF8Q02556 426 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 PCDH1Q08174 1060 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 RCAN2Q14206 197 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 SWI5Q1ZZU3 235 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 TMEM35AQ53FP2 167 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 TBCELQ5QJ74 424 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 OR5M10Q6IEU7 315 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 FAM111BQ6SJ93 734 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 ADAMTSL2Q86TH1 951 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 ZNF610Q8N9Z0 462 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 LILRB1Q8NHL6 650 aaPredicted RBP8.82□□□□□ -1
COL4A5-204ENST00000477429 HUS1BQ8NHY5 278 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 TANKQ92844 425 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 EXT2Q93063 718 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 TP53INP1Q96A56 240 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 VPS39Q96JC1 886 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 KRT12Q99456 494 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 MTERF1Q99551 399 aaKnown RBP8.82□□□□□ -1
COL4A5-204ENST00000477429 TM9SF2Q99805 663 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 PRR14Q9BWN1 585 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 ROGDIQ9GZN7 287 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 DERL2Q9GZP9 239 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 PIGMQ9H3S5 423 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 SNX15Q9NRS6 342 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 NDRG3Q9UGV2 375 aa8.82□□□□□ -1
COL4A5-204ENST00000477429 CORO1CQ9ULV4 474 aaPredicted RBP8.82□□□□□ -1
COL4A5-204ENST00000477429 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms