RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CCPG1Q9ULG6 757 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 RNF24Q9Y225 148 aa4.7□□□□□ -1.66
SMC5-203ENST00000475540 STRAPQ9Y3F4 350 aaKnown RBP4.7□□□□□ -1.66
SMC5-203ENST00000475540 TRBV2A0A0J9YWF9 115 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 RASGRF2O14827 1237 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 PEX11AO75192 247 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 LY6G6DO95868 133 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 ETS1P14921 441 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 AHCYP23526 432 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 MTIF2P46199 727 aaKnown RBP4.69□□□□□ -1.66
SMC5-203ENST00000475540 ASMTP46597 345 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 IGLV3-21P80748 117 aaPredicted RBP4.69□□□□□ -1.66
SMC5-203ENST00000475540 P2RY14Q15391 338 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 DCAF12Q5T6F0 453 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 NEK5Q6P3R8 708 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 RBM43Q6ZSC3 357 aaKnown RBP4.69□□□□□ -1.66
SMC5-203ENST00000475540 NAXDQ8IW45 347 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 C11orf42Q8N5U0 333 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 IPMKQ8NFU5 416 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 NAP1L3Q99457 506 aaPredicted RBP4.69□□□□□ -1.66
SMC5-203ENST00000475540 TEX13BQ9BXU2 312 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 DPH5Q9H2P9 285 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 RNPEPL1Q9HAU8 725 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 SYTL2Q9HCH5 934 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 DCAF16Q9NXF7 216 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 SENP1Q9P0U3 644 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 CGNQ9P2M7 1197 aaKnown RBP4.69□□□□□ -1.66
SMC5-203ENST00000475540 EXOC7Q9UPT5 735 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 KCNK6Q9Y257 313 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 KIF3AQ9Y496 699 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 TEX264Q9Y6I9 313 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 CLCA3PQ9Y6N3 262 aa4.69□□□□□ -1.66
SMC5-203ENST00000475540 A0A1W2PNU3 283 aaPredicted RBP4.68□□□□□ -1.66
SMC5-203ENST00000475540 CACNB4O00305 520 aaPredicted RBP4.68□□□□□ -1.66
SMC5-203ENST00000475540 SERPINB6P35237 376 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 CAMLGP49069 296 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 UCP2P55851 309 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 LCP2Q13094 533 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 GIT2Q14161 759 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 HEPACAMQ14CZ8 416 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 TRADDQ15628 312 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 C14orf28Q4W4Y0 310 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 IFI44LQ53G44 452 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 DDI2Q5TDH0 399 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 WDR25Q64LD2 544 aaPredicted RBP4.68□□□□□ -1.66
SMC5-203ENST00000475540 PAMR1Q6UXH9 720 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 Q6ZRG5 221 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 WDR49Q8IV35 697 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 KDM8Q8N371 416 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 ZNF491Q8N8L2 437 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 CHDHQ8NE62 594 aaPredicted RBP4.68□□□□□ -1.66
SMC5-203ENST00000475540 FBXO25Q8TCJ0 367 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 TMEM186Q96B77 213 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 RANBP9Q96S59 729 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 SPAG8Q99932 426 aaPredicted RBP4.68□□□□□ -1.66
SMC5-203ENST00000475540 NT5C3AQ9H0P0 336 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 CXXC4Q9H2H0 198 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 RWDD1Q9H446 243 aaPredicted RBP4.68□□□□□ -1.66
SMC5-203ENST00000475540 IL1RL2Q9HB29 575 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 RCOR3Q9P2K3 495 aaPredicted RBP4.68□□□□□ -1.66
SMC5-203ENST00000475540 SEC14L4Q9UDX3 406 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 MAD2L2Q9UI95 211 aa4.68□□□□□ -1.66
SMC5-203ENST00000475540 ZNF256Q9Y2P7 627 aaPredicted RBP4.68□□□□□ -1.66
SMC5-203ENST00000475540 DHX29Q7Z478 1369 aaKnown RBP4.67□□□□□ -1.66
SMC5-203ENST00000475540 IFNB1P01574 187 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 ABHD2P08910 425 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 MMP10P09238 476 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 RPS2P15880 293 aaKnown RBP4.67□□□□□ -1.66
SMC5-203ENST00000475540 ADSSP30520 456 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 HMGCLP35914 325 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 ACAA2P42765 397 aaKnown RBP4.67□□□□□ -1.66
SMC5-203ENST00000475540 KCNK10P57789 538 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 NDPQ00604 133 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 LRRC74AQ0VAA2 488 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 CD164L2Q6UWJ8 174 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 TMEM110Q86TL2 294 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 ZNF410Q86VK4 478 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 ELMOD2Q8IZ81 293 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 Q8N7P7 452 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 GMCL1P1Q8NEA9 526 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 OR4F5Q8NH21 305 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 HAS2Q92819 552 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 BADQ92934 168 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 PNPLA2Q96AD5 504 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 B3GALT6Q96L58 329 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 YTHDF1Q9BYJ9 559 aaKnown RBP4.67□□□□□ -1.66
SMC5-203ENST00000475540 ZNF446Q9NWS9 450 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 TAS2R16Q9NYV7 291 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 SPASTQ9UBP0 616 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 EXTL2Q9UBQ6 330 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 TRIM10Q9UDY6 481 aa4.67□□□□□ -1.66
SMC5-203ENST00000475540 TRMT6Q9UJA5 497 aaKnown RBP4.67□□□□□ -1.66
SMC5-203ENST00000475540 A0A0A6YYC8 382 aaPredicted RBP4.66□□□□□ -1.66
SMC5-203ENST00000475540 TMEM129A0AVI4 362 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 I3L1I5 382 aaPredicted RBP4.66□□□□□ -1.66
SMC5-203ENST00000475540 MT-ATP6P00846 226 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 IGHG3P01860 377 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 STIP1P31948 543 aaKnown RBP4.66□□□□□ -1.66
SMC5-203ENST00000475540 FNTAP49354 379 aa4.66□□□□□ -1.66
SMC5-203ENST00000475540 SERPINH1P50454 418 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms