RNA–Protein interactions for RNA: ENST00000473863.1

TRAIP-204, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-204ENST00000473863 PTPMT1Q8WUK0 201 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-204ENST00000473863 HOXB13Q92826 284 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-204ENST00000473863 KIAA1143Q96AT1 154 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-204ENST00000473863 WDR77Q9BQA1 342 aaPredicted RBP12.47□□□□□ -0.41
TRAIP-204ENST00000473863 BTBD10Q9BSF8 475 aa12.47□□□□□ -0.41
TRAIP-204ENST00000473863 RAD21L1Q9H4I0 556 aa12.47□□□□□ -0.41
TRAIP-204ENST00000473863 TPT1P8Q9HAU6 139 aa12.47□□□□□ -0.41
TRAIP-204ENST00000473863 ZCCHC3Q9NUD5 404 aaKnown RBP12.47□□□□□ -0.41
TRAIP-204ENST00000473863 PRPF19Q9UMS4 504 aaKnown RBP12.47□□□□□ -0.41
TRAIP-204ENST00000473863 HS3ST3B1Q9Y662 390 aa12.47□□□□□ -0.41
TRAIP-204ENST00000473863 CELSR3Q9NYQ7 3312 aa12.47□□□□□ -0.41
TRAIP-204ENST00000473863 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 C17orf105B2RV13 164 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 CLIC1O00299 241 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 UPK1AO00322 258 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 PRAMEF2O60811 474 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 KRT75O95678 551 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 DDAH2O95865 285 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 CBX7O95931 251 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 IFNA16P05015 189 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 GSNP06396 782 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 F8A1P23610 371 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 CCT3P49368 545 aaKnown RBP12.46□□□□□ -0.41
TRAIP-204ENST00000473863 MVDP53602 400 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 FOXL2P58012 376 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 OR4D2P58180 307 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 PSME3P61289 254 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 MRPS35P82673 323 aaKnown RBP12.46□□□□□ -0.41
TRAIP-204ENST00000473863 SLC25A3Q00325 362 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 CAPRIN1Q14444 709 aaKnown RBP12.46□□□□□ -0.41
TRAIP-204ENST00000473863 SSPNQ14714 243 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 SFT2D3Q587I9 215 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 EXOSC6Q5RKV6 272 aaKnown RBP12.46□□□□□ -0.41
TRAIP-204ENST00000473863 NANOGP8Q6NSW7 305 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 ZCCHC12Q6PEW1 402 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 FAM111BQ6SJ93 734 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 CPEB2Q7Z5Q1 589 aaKnown RBP12.46□□□□□ -0.41
TRAIP-204ENST00000473863 TMEM151BQ8IW70 566 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 ADCY4Q8NFM4 1077 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 OR52N2Q8NGI0 321 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 SNIP1Q8TAD8 396 aaKnown RBP12.46□□□□□ -0.41
TRAIP-204ENST00000473863 KAT2AQ92830 837 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 TMEM125Q96AQ2 219 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 PPWD1Q96BP3 646 aaKnown RBP12.46□□□□□ -0.41
TRAIP-204ENST00000473863 GIMAP5Q96F15 307 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 VPS50Q96JG6 964 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 SLC39A3Q9BRY0 314 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 SPATA9Q9BWV2 254 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 SEMA4CQ9C0C4 833 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 ZNF700Q9H0M5 742 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 NANOGQ9H9S0 305 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 GPATCH2Q9NW75 528 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 TMEM181Q9P2C4 612 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.46□□□□□ -0.41
TRAIP-204ENST00000473863 SNX8Q9Y5X2 465 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 CLCA3PQ9Y6N3 262 aa12.46□□□□□ -0.41
TRAIP-204ENST00000473863 IGHV1-45A0A0A0MS14 117 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 OR6C76A6NM76 312 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 EVPLLA8MZ36 301 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 SOCS6O14544 535 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 GYG2O15488 501 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 ASNA1O43681 348 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 CLPSP04118 112 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 ATXN8OSP0DMR3 200 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 COX6A1P12074 109 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 BMP2P12643 396 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 GPX2P18283 190 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 SPINK2P20155 84 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 PTGER1P34995 402 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 CHI3L1P36222 383 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 SLC7A2P52569 658 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 RPS18P62269 152 aaKnown RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 PCOLCEQ15113 449 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 SPDYE7PQ495Y7 208 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 CRTC2Q53ET0 693 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 PAPD4Q6PIY7 484 aaKnown RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 BNC2Q6ZN30 1099 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 PPP1R32Q7Z5V6 425 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 NET1Q7Z628 596 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 RAB43Q86YS6 212 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 SLC15A3Q8IY34 581 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 DEFB107AQ8IZN7 70 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 ZNF615Q8N8J6 731 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 NFAM1Q8NET5 270 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 NUP43Q8NFH3 380 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 OR1N1Q8NGS0 311 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 OR5AK3PQ8NH89 298 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 SLC2A12Q8TD20 617 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 ADAMTS17Q8TE56 1095 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 ZCCHC14Q8WYQ9 949 aaKnown RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 AURKBQ96GD4 344 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 IP6K3Q96PC2 410 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 LPAR4Q99677 370 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 MMADHCQ9H3L0 296 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 IKZF5Q9H5V7 419 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 KAT8Q9H7Z6 458 aaKnown RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 GPN2Q9H9Y4 310 aaPredicted RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 IL1RL2Q9HB29 575 aa12.45□□□□□ -0.42
TRAIP-204ENST00000473863 PNO1Q9NRX1 252 aaKnown RBP12.45□□□□□ -0.42
TRAIP-204ENST00000473863 GIN1Q9NXP7 522 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms