RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 ZNF225Q9UK10 706 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 PSME2Q9UL46 239 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 DTX4Q9Y2E6 619 aa20.66■□□□□ 0.9
C9orf3-213ENST00000471978 ATP1B1P05026 303 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 KRT15P19012 456 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 CSNK2A2P19784 350 aaPredicted RBP20.65■□□□□ 0.9
C9orf3-213ENST00000471978 TAC1P20366 129 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 ABCD3P28288 659 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 CASP3P42574 277 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 MGAT2Q10469 447 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 MAP4K2Q12851 820 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 PRICKLE4Q2TBC4 344 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 SLC25A35Q3KQZ1 300 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 RIPPLY2Q5TAB7 128 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 FAM111BQ6SJ93 734 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 C1orf52Q8N6N3 182 aaKnown RBP20.65■□□□□ 0.9
C9orf3-213ENST00000471978 KLHL29Q96CT2 875 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 GNRHR2Q96P88 292 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 NXF5Q9H1B4 397 aaKnown RBP20.65■□□□□ 0.9
C9orf3-213ENST00000471978 TMEM216Q9P0N5 145 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 VPS29Q9UBQ0 182 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 BCAP29Q9UHQ4 241 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 NFU1Q9UMS0 254 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 CFL2Q9Y281 166 aa20.65■□□□□ 0.9
C9orf3-213ENST00000471978 SUPT7LO94864 414 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 GCAP28676 217 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 ALDH9A1P49189 494 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 MYBPHQ13203 477 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 EXOSC7Q15024 291 aaKnown RBP20.64■□□□□ 0.89
C9orf3-213ENST00000471978 NNATQ16517 81 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 TCHHL1Q5QJ38 904 aaPredicted RBP20.64■□□□□ 0.89
C9orf3-213ENST00000471978 CES4AQ5XG92 561 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 TIFABQ6ZNK6 161 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 WDR53Q7Z5U6 358 aaPredicted RBP20.64■□□□□ 0.89
C9orf3-213ENST00000471978 CDYL2Q8N8U2 506 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 ADCY4Q8NFM4 1077 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 MTBPQ96DY7 904 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 FAIM2Q9BWQ8 316 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 UBQLN3Q9H347 655 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 SLC24A3Q9HC58 644 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 MAT2BQ9NZL9 334 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 C15orf41Q9Y2V0 281 aa20.64■□□□□ 0.89
C9orf3-213ENST00000471978 MANBAO00462 879 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 KRT6AP02538 564 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 KRT6BP04259 564 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 HPNP05981 417 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 ABCB1P08183 1280 aaPredicted RBP20.63■□□□□ 0.89
C9orf3-213ENST00000471978 ABHD2P08910 425 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 KRT6CP48668 564 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 CDK9P50750 372 aaKnown RBP20.63■□□□□ 0.89
C9orf3-213ENST00000471978 TRA2BP62995 288 aaKnown RBP20.63■□□□□ 0.89
C9orf3-213ENST00000471978 RASA2Q15283 850 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 UNC50Q53HI1 259 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 ZNF678Q5SXM1 525 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 FNDC7Q5VTL7 733 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 FAM180BQ6P0A1 224 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 TIMP4Q99727 224 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 ITPAQ9BY32 194 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 ZNF639Q9UID6 485 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 ZNF780BQ9Y6R6 833 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 SPG11Q96JI7 2443 aa20.63■□□□□ 0.89
C9orf3-213ENST00000471978 HSPB2A8KAH6 182 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 AHRRA9YTQ3 701 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 DLX3O60479 287 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 PPM1BO75688 479 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 HSD3B1P14060 373 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 NAGAP17050 411 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 HSD3B2P26439 372 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 DLX5P56178 289 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 DUSP2Q05923 314 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 CRYZQ08257 329 aaKnown RBP20.62■□□□□ 0.89
C9orf3-213ENST00000471978 TOMM20Q15388 145 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 HSPB2Q16082 182 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 SEM1Q6ZVN7 128 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 TMEM200AQ86VY9 491 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 SIMC1Q8NDZ2 872 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 CNRIP1Q96F85 164 aaPredicted RBP20.62■□□□□ 0.89
C9orf3-213ENST00000471978 TMEM41AQ96HV5 264 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 LCORQ96JN0 433 aaPredicted RBP20.62■□□□□ 0.89
C9orf3-213ENST00000471978 TMEM237Q96Q45 408 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 ZNF382Q96SR6 550 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 METTL7AQ9H8H3 244 aa20.62■□□□□ 0.89
C9orf3-213ENST00000471978 GNB5O14775 395 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 CDH16O75309 829 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 ULK1O75385 1050 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 ESRRBO95718 433 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 CBX7O95931 251 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 FREM3P0C091 2139 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 CSTF3Q12996 717 aaKnown RBP20.61■□□□□ 0.89
C9orf3-213ENST00000471978 LTB4RQ15722 352 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 ACSF3Q4G176 576 aaPredicted RBP20.61■□□□□ 0.89
C9orf3-213ENST00000471978 TRMT12Q53H54 448 aaKnown RBP20.61■□□□□ 0.89
C9orf3-213ENST00000471978 TIGD3Q6B0B8 471 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 GPRIN3Q6ZVF9 776 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 TRMT10CQ7L0Y3 403 aaKnown RBP20.61■□□□□ 0.89
C9orf3-213ENST00000471978 NUP54Q7Z3B4 507 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 LCA5Q86VQ0 697 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 OR52R1Q8NGF1 315 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 METTL6Q8TCB7 284 aa20.61■□□□□ 0.89
C9orf3-213ENST00000471978 CTHRC1Q96CG8 243 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms