RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 ZNF763Q0D2J5 394 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ASPGQ86U10 573 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SLC22A16Q86VW1 577 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 NKD2Q969F2 451 aaPredicted RBP12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FAM173AQ9BQD7 235 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RANBP3Q9H6Z4 567 aaPredicted RBP12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ABRACLQ9P1F3 81 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 B4GALT6Q9UBX8 382 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 WIF1Q9Y5W5 379 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 C2orf78A6NCI8 922 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 AHSGP02765 367 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FXNQ16595 210 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 HSD17B12Q53GQ0 312 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PAN3Q58A45 887 aaKnown RBP12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SLC36A4Q6YBV0 504 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CPNE8Q86YQ8 564 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SYT14Q8NB59 555 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FCRL5Q96RD9 977 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 GIMAP2Q9UG22 337 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 A8MT66 165 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 GABRDO14764 452 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZNF780AO75290 641 aaPredicted RBP12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CLIC3O95833 236 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZNF30P17039 623 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 IL1RNP18510 177 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PGAP3Q96FM1 320 aaPredicted RBP12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 OR52B2Q96RD2 323 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 MED16Q9Y2X0 877 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CMAHPQ9Y471 501 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CDH10Q9Y6N8 788 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CENPBD1B2RD01 187 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZNF821O75541 412 aaPredicted RBP12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 LCATP04180 440 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PNMTP11086 282 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TRAM2Q15035 370 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 REEP3Q6NUK4 255 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 STEAP2Q8NFT2 490 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 OR52E2Q8NGJ4 325 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ACOXLQ9NUZ1 547 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SDHAF2Q9NX18 166 aa12.66□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 AGAP5A6NIR3 686 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CREBL2O60519 120 aaPredicted RBP12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 GABRA2P47869 451 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 MS4A13Q5J8X5 152 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 KCTD18Q6PI47 426 aaPredicted RBP12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 BRI3BPQ8WY22 251 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 TPPP3Q9BW30 176 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 KCMF1Q9P0J7 381 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 VDAC3Q9Y277 283 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PCDHGA7Q9Y5G6 932 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZNF891A8MT65 544 aaPredicted RBP12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 BEST1O76090 585 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DEFA4P12838 97 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 VIPR2P41587 438 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 MAB21L1Q13394 359 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 MEP1AQ16819 746 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 C9orf135Q5VTT2 229 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RBMS3Q6XE24 437 aaKnown RBP12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 C15orf52Q6ZUT6 534 aaKnown RBP12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PLXDC1Q8IUK5 500 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 NEIL3Q8TAT5 605 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 IL1F10Q8WWZ1 152 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 HHIPQ96QV1 700 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 HES7Q9BYE0 225 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DYNLRB1Q9NP97 96 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 EEF1E1O43324 174 aaKnown RBP12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RORAP35398 523 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 Q1RN00 199 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 AWAT2Q6E213 333 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 OR14K1Q8NGZ2 314 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CREB3L4Q8TEY5 395 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 DPH7Q9BTV6 452 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 SETBP1Q9Y6X0 1596 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CRXO43186 299 aaPredicted RBP12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 RBBP9O75884 186 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ATG12O94817 140 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PAHP00439 452 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZNF28P17035 718 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 F8A1P23610 371 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PLA2G7Q13093 441 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 C9orf152Q5JTZ5 239 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 FCRLBQ6BAA4 426 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CEACAM19Q7Z692 300 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CARM1Q86X55 608 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CILP2Q8IUL8 1156 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZFP41Q8N8Y5 198 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CASD1Q96PB1 797 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CWH43Q9H720 699 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 KLHL42Q9P2K6 505 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PPRC1Q5VV67 1664 aaKnown RBP12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 OR5M10Q6IEU7 315 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZNF765Q7L2R6 523 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 LILRB2Q8N423 598 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 GNPDA2Q8TDQ7 276 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 MSANTD3Q96H12 275 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 CD244Q9BZW8 370 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 PLEKHM1Q9Y4G2 1056 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 KNG1P01042 644 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 ZNF43P17038 809 aa12.65□□□□□ -0.38
NPHP3-ACAD11-201ENST00000471702 GRIA2P42262 883 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms