RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 PAGE2BQ5JRK9 111 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 CCDC158Q5M9N0 1113 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 TAF3Q5VWG9 929 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 ZCCHC12Q6PEW1 402 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 MFSD7Q6UXD7 560 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 STOX1Q6ZVD7 989 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 GPR142Q7Z601 462 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 LUZP1Q86V48 1076 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 HOOK3Q86VS8 718 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 TMEM126BQ8IUX1 230 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 CCDC83Q8IWF9 413 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 OR4L1Q8NH43 312 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 CCDC26Q8TAB7 109 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 RFESDQ8TAC1 157 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 RDH11Q8TC12 318 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 HAS2Q92819 552 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 FAM104AQ969W3 186 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 C16orf74Q96GX8 76 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 EPSTI1Q96J88 318 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 C9orf85Q96MD7 179 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 SPAG8Q99932 426 aaPredicted RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 CITED2Q99967 270 aaPredicted RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 DDX50Q9BQ39 737 aaKnown RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 FAM173AQ9BQD7 235 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 NTMT1Q9BV86 223 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 UTP14AQ9BVJ6 771 aaKnown RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 GPR174Q9BXC1 333 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 NMUR2Q9GZQ4 415 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 NAPBQ9H115 298 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 TMEM206Q9H813 350 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 RNPEPL1Q9HAU8 725 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 ESM1Q9NQ30 184 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 VPS18Q9P253 973 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 DPM3Q9P2X0 92 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 DNAJB9Q9UBS3 223 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 EMCNQ9ULC0 261 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 ITM2BQ9Y287 266 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 SLC9A8Q9Y2E8 581 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 MTF2Q9Y483 593 aaPredicted RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 RNF115Q9Y4L5 304 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 ZFP37Q9Y6Q3 630 aaPredicted RBP0.91□□□□□ -2.26
UBXN4-207ENST00000471246 TNRQ92752 1358 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 RLFQ13129 1914 aa0.91□□□□□ -2.26
UBXN4-207ENST00000471246 CDC42BPBQ9Y5S2 1711 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 A0A0U1RQK1 487 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 C13orf42A0A1B0GVH6 325 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 MFSD2BA6NFX1 497 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 YJEFN3A6XGL0 299 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 TRIM49D1C9J1S8 452 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 CYB561D2O14569 222 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 SH2D1BO14796 132 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 CRCPO75575 148 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 PDE5AO76074 875 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 TXNDC12O95881 172 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 IGHV3-23P01764 117 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ZNF853P0CG23 659 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 CCDC166P0CW27 439 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 SCG2P13521 617 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 PSMB1P20618 241 aaKnown RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 IGHV1-2P23083 117 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 RPA1P27694 616 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 SERPINB6P35237 376 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 OR3A4PP47883 348 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 OR1D4P47884 311 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ALDH3B2P48448 385 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 NT5C2P49902 561 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 HNRNPA3P51991 378 aaKnown RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 VCPP55072 806 aaKnown RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 DIO3P55073 304 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 HAND2P61296 217 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ST8SIA6P61647 398 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 RPS8P62241 208 aaKnown RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 RPS4XP62701 263 aaKnown RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 CDKL1Q00532 357 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 MECOMQ03112 1051 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 RPS6KA1Q15418 735 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 TRADDQ15628 312 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 CD226Q15762 336 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 STXBP2Q15833 593 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 MEP1BQ16820 701 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 DCAF4L1Q3SXM0 396 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 GLYR1Q49A26 553 aaPredicted RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ANKRD20A4Q4UJ75 823 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ANKRD20A8PQ5CZ79 823 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 TCHHL1Q5QJ38 904 aaPredicted RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ANKRD20A2Q5SQ80 823 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ANKRD20A1Q5TYW2 823 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ANKRD20A3Q5VUR7 823 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 OTPQ5XKR4 325 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 RTL6Q6ICC9 239 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 CDC42EP5Q6NZY7 148 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 Q6P435 159 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 CD164L2Q6UWJ8 174 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 TFAP2EQ6VUC0 442 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ASRGL1Q7L266 308 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 MOB1BQ7L9L4 216 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 PIWIL3Q7Z3Z3 882 aaKnown RBP0.9□□□□□ -2.27
UBXN4-207ENST00000471246 ERICH1Q86X53 443 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 VSIG1Q86XK7 387 aa0.9□□□□□ -2.27
UBXN4-207ENST00000471246 TUSC5Q8IXB3 177 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms