RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 TGFB1P01137 390 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 SERPIND1P05546 499 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 ZNF888P0CJ79 500 aaPredicted RBP8.41□□□□□ -1.06
SF3A1-206ENST00000471037 SMIM10L1P0DMW3 83 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 RNH1P13489 461 aaKnown RBP8.41□□□□□ -1.06
SF3A1-206ENST00000471037 IDO1P14902 403 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 MAOAP21397 527 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 ATP4BP51164 291 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 CLCN2P51788 898 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 RPL38P63173 70 aaKnown RBP8.41□□□□□ -1.06
SF3A1-206ENST00000471037 BTG2P78543 158 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 EMX2Q04743 252 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 TGM3Q08188 693 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 ACSM2AQ08AH3 577 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 GSTA3Q16772 222 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 ADPRMQ3LIE5 342 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 GALNTL6Q49A17 601 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 EMC4Q5J8M3 183 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 ACSM2BQ68CK6 577 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 GALNT18Q6P9A2 607 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 FAM9CQ8IZT9 166 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 CYP4Z2PQ8N1L4 340 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 RNF175Q8N4F7 328 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 FNDC5Q8NAU1 212 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 UTP15Q8TED0 518 aaKnown RBP8.41□□□□□ -1.06
SF3A1-206ENST00000471037 RND1Q92730 232 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 GAL3ST3Q96A11 431 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 RGMAQ96B86 450 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 SMIM10Q96HG1 83 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 FCRL1Q96LA6 429 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 SLC6A16Q9GZN6 736 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 REXO4Q9GZR2 422 aaKnown RBP8.41□□□□□ -1.06
SF3A1-206ENST00000471037 OR51B5Q9H339 312 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 SLC24A3Q9HC58 644 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 KCNJ16Q9NPI9 418 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 SIRT5Q9NXA8 310 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 ASIC5Q9NY37 505 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 NOP53Q9NZM5 478 aaKnown RBP8.41□□□□□ -1.06
SF3A1-206ENST00000471037 KCNN3Q9UGI6 736 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 MMACHCQ9Y4U1 282 aa8.41□□□□□ -1.06
SF3A1-206ENST00000471037 TRBV11-1A0A0K0K1C0 115 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 FAM221AA4D161 298 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 NKX2-6A6NCS4 301 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 FAM90A27PA6NNH2 459 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 PSMD12O00232 456 aaPredicted RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 SLC22A2O15244 555 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 RRP9O43818 475 aaKnown RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 CDC40O60508 579 aaKnown RBP eCLIP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 ITGA10O75578 1167 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 TBX6O95947 436 aaPredicted RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 HOXD4P09016 255 aaPredicted RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 PRPS2P11908 318 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 ADSLP30566 484 aaPredicted RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 HNRNPH1P31943 449 aaKnown RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 RFC3P40938 356 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 MRPL19P49406 292 aaKnown RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 GPR143P51810 404 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 RAP1GDS1P52306 607 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 ART1P52961 327 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 STX1BP61266 288 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 TBL3Q12788 808 aaKnown RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 HYAL2Q12891 473 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 KIAA0040Q15053 153 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 RFTN2Q52LD8 501 aaPredicted RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 TOR1AIP1Q5JTV8 583 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 TRIM40Q6P9F5 258 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 PAGE2Q7Z2X7 111 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 MDGA2Q7Z553 956 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 SCUBE1Q8IWY4 988 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 GPALPP1Q8IXQ4 340 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 METTL4Q8N3J2 472 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 RPRMLQ8N4K4 120 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 TMEM156Q8N614 296 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 C1orf52Q8N6N3 182 aaKnown RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 PSD4Q8NDX1 1056 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 OR2L5Q8NG80 312 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 OR52N2Q8NGI0 321 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 MS4A6EQ96DS6 147 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 C11orf24Q96F05 449 aaPredicted RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 VMP1Q96GC9 406 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 APIPQ96GX9 242 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 QRFPRQ96P65 431 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 KCNC2Q96PR1 638 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 LRRC37BQ96QE4 947 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 F2RL3Q96RI0 385 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 TBCDQ9BTW9 1192 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 MRPL1Q9BYD6 325 aaKnown RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 UCK2Q9BZX2 261 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 ROGDIQ9GZN7 287 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 ZDHHC11Q9H8X9 412 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 TIMMDC1Q9NPL8 285 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 NECTIN3Q9NQS3 549 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 SAR1AQ9NR31 198 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 AIG1Q9NVV5 245 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 GIMAP2Q9UG22 337 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 ZNF223Q9UK11 482 aaPredicted RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 ADAM29Q9UKF5 820 aa8.4□□□□□ -1.06
SF3A1-206ENST00000471037 EIF3LQ9Y262 564 aaKnown RBP8.4□□□□□ -1.06
SF3A1-206ENST00000471037 CLDN16Q9Y5I7 305 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms