RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 PLEKHG7Q6ZR37 379 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 IQCHQ86VS3 1027 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 SLC22A16Q86VW1 577 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 TTLQ8NG68 377 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 OR9A2Q8NGT5 310 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 C9orf43Q8TAL5 461 aaPredicted RBP13.83□□□□□ -0.2
CBWD3-205ENST00000469687 RASSF5Q8WWW0 418 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 OPALINQ96PE5 141 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 MTIF3Q9H2K0 278 aaKnown RBP13.83□□□□□ -0.2
CBWD3-205ENST00000469687 C6orf106Q9H6K1 298 aaPredicted RBP13.83□□□□□ -0.2
CBWD3-205ENST00000469687 CD93Q9NPY3 652 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 ABCB10Q9NRK6 738 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 TVP23BQ9NYZ1 205 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 CES1P1Q9UKY3 287 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 CEP290O15078 2479 aa13.83□□□□□ -0.2
CBWD3-205ENST00000469687 POM121BA6NF01 834 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 RFXAPO00287 272 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 PLRG1O43660 514 aaKnown RBP13.82□□□□□ -0.2
CBWD3-205ENST00000469687 PRKYO43930 277 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 KIAA0513O60268 411 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 GPX5O75715 221 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 PORP16435 677 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-205ENST00000469687 AK4P27144 223 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TEAD1P28347 426 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 KHKP50053 298 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 CLDN2P57739 230 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 OLR1P78380 273 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 SLC13A2Q13183 592 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 LTB4RQ15722 352 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 GPAT3Q53EU6 434 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 CASP12Q6UXS9 341 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 KRT73Q86Y46 540 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 KCT2Q8NC54 265 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 OR2L5Q8NG80 312 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 OR4K5Q8NGD3 323 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 FNDC11Q9BVV2 318 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 NXF2Q9GZY0 626 aaKnown RBP13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBC1D29Q9UFV1 150 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 LSM2Q9Y333 95 aaKnown RBP13.82□□□□□ -0.2
CBWD3-205ENST00000469687 PCDHGA4Q9Y5G9 962 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBC1D3DA0A087WVF3 549 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBC1D3IA0A087WXS9 549 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBC1D3EA0A087X179 549 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBC1D3KA0A087X1G2 549 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 A0A1W2PRQ8 180 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBC1D3FA6NER0 549 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBC1D3LB9A6J9 549 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 H0Y8X5 98 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBX1O43435 398 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 CSO75390 466 aaKnown RBP13.82□□□□□ -0.2
CBWD3-205ENST00000469687 LGI1O95970 557 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBC1D3HP0C7X1 549 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 MC3RP41968 323 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 ZNF91Q05481 1191 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 ITPRIPL2Q3MIP1 535 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TMEM196Q5HYL7 178 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TPRG1LQ5T0D9 272 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBC1D3GQ6DHY5 549 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBC1D3CQ6IPX1 549 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 C19orf48Q6RUI8 117 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TBC1D3Q8IZP1 549 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-205ENST00000469687 CADM3Q8N126 398 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 SLC34A3Q8N130 599 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 AMER2Q8N7J2 671 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 MORN4Q8NDC4 146 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 FAM83FQ8NEG4 500 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-205ENST00000469687 KBTBD8Q8NFY9 601 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 OR4E2Q8NGC2 313 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 TAPBPLQ9BX59 468 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 RAB11FIP5Q9BXF6 653 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 HHATLQ9HCP6 504 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 POLMQ9NP87 494 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-205ENST00000469687 GPR55Q9Y2T6 319 aaPredicted RBP13.82□□□□□ -0.2
CBWD3-205ENST00000469687 KLK4Q9Y5K2 254 aa13.82□□□□□ -0.2
CBWD3-205ENST00000469687 FANCMQ8IYD8 2048 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 TRBV23OR9-2A0A075B6M9 112 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 ISM1B1AKI9 464 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 CCRL2O00421 344 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 BTN3A3O00478 584 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 TLX2O43763 284 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-205ENST00000469687 UPK1BO75841 260 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 PIPP12273 146 aaPredicted RBP13.81□□□□□ -0.2
CBWD3-205ENST00000469687 F3P13726 295 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 COL9A1P20849 921 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 GTF2E2P29084 291 aaKnown RBP13.81□□□□□ -0.2
CBWD3-205ENST00000469687 TMEM201Q5SNT2 666 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 ACSM5Q6NUN0 579 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 SLC48A1Q6P1K1 146 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 CCL4L1Q8NHW4 92 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 BBS10Q8TAM1 723 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 KAT2AQ92830 837 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 TSSK6Q9BXA6 273 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 PLA2G12AQ9BZM1 189 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 MIR1-1HGQ9H1L0 117 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 ANKHQ9HCJ1 492 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 BCL2L10Q9HD36 194 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 SLC9A8Q9Y2E8 581 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 WWP2O00308 870 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 ASGR2P07307 311 aa13.81□□□□□ -0.2
CBWD3-205ENST00000469687 AHRP35869 848 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms