RNA–Protein interactions for RNA: ENST00000469479.1

VPS8-219, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 4

Gene VPS8, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-219ENST00000469479 A0A1B0GVC2 190 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 FAM170AA1A519 330 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 C5orf60A6NFR6 353 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 C2orf81A6NN90 581 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 AGAP14A8MT82 685 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 ZNF814B7Z6K7 855 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 NPIPA2E9PIF3 369 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 NPIPA3F8WFD2 350 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 CD5LO43866 347 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 MFSD11O43934 449 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 HS6ST1O60243 411 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 SRP72O76094 671 aaKnown RBP4.31□□□□□ -1.72
VPS8-219ENST00000469479 IGHG3P01860 377 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 MYBL1P10243 752 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 PKMP14618 531 aaKnown RBP4.31□□□□□ -1.72
VPS8-219ENST00000469479 PAX1P15863 534 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 IL10P22301 178 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 MCM3P25205 808 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 EPHA3P29320 983 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 PKLRP30613 574 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 VSX2P58304 361 aaPredicted RBP4.31□□□□□ -1.72
VPS8-219ENST00000469479 EEF1A1P68104 462 aaKnown RBP4.31□□□□□ -1.72
VPS8-219ENST00000469479 OGDHQ02218 1023 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 ACTN3Q08043 901 aaPredicted RBP4.31□□□□□ -1.72
VPS8-219ENST00000469479 FAM53BQ14153 422 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 PDK2Q15119 407 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 NDUFA9Q16795 377 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 SYTL3Q4VX76 610 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 C1orf185Q5T7R7 199 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 EEF1A1P5Q5VTE0 462 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 PCGF5Q86SE9 256 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 TMTC1Q8IUR5 882 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 SPARTQ8N0X7 666 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 FBXW8Q8N3Y1 598 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 LIX1Q8N485 282 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 METTL27Q8N6F8 245 aaPredicted RBP4.31□□□□□ -1.72
VPS8-219ENST00000469479 LMNTD1Q8N9Z9 388 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 OR5AR1Q8NGP9 310 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 OR2L8Q8NGY9 312 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 SGMS2Q8NHU3 365 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 FAM71BQ8TC56 605 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 MCOLN3Q8TDD5 553 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 NEUROG1Q92886 237 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 HSPBAP1Q96EW2 488 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 MMABQ96EY8 250 aaPredicted RBP4.31□□□□□ -1.72
VPS8-219ENST00000469479 SLC35A4Q96G79 324 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 CYTH2Q99418 400 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 ZNF670Q9BS34 389 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 VN1R1Q9GZP7 353 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 CXorf56Q9H5V9 222 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 ZDHHC11Q9H8X9 412 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 LRTM1Q9HBL6 345 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 BPIFA1Q9NP55 256 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 PNPLA3Q9NST1 481 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 TMEM160Q9NX00 188 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 ANKRD10Q9NXR5 420 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 NDRG3Q9UGV2 375 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 FAM153AQ9UHL3 310 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 ACAD8Q9UKU7 415 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 FAM215AQ9Y5M1 114 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.31□□□□□ -1.72
VPS8-219ENST00000469479 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.31□□□□□ -1.72
VPS8-219ENST00000469479 CUBNO60494 3623 aa4.31□□□□□ -1.72
VPS8-219ENST00000469479 IGLV3-16A0A075B6K0 115 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 MBD3L4A6NDZ8 208 aaPredicted RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 MBD3L5A6NJ08 208 aaPredicted RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 A8MV72 311 aaPredicted RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 H0YIG0 161 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 KCNK1O00180 336 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 GAPDHSO14556 408 aaPredicted RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 SPRY2O43597 315 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 HCN1O60741 890 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 EIF2S1P05198 315 aaKnown RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 CD9P21926 228 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 ACADLP28330 430 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 PCYT1AP49585 367 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 ENTPD1P49961 510 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 ARSEP51690 589 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 ITGA8P53708 1063 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 P2RX3P56373 397 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 POLR2FP61218 127 aaKnown RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 PPIAP62937 165 aaKnown RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 SKP1P63208 163 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 PLGLB1Q02325 96 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 RELAQ04206 551 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 EGR4Q05215 589 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 TBL3Q12788 808 aaKnown RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 MESDQ14696 234 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 PDK1Q15118 436 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 HADHQ16836 314 aaKnown RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 KRTAP24-1Q3LI83 254 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 MINDY4Q4G0A6 757 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 ZNF658BQ4V348 819 aaPredicted RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 PLA1AQ53H76 456 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 LIPNQ5VXI9 398 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 NCBP2-AS2Q69YL0 99 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 ISM2Q6H9L7 571 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 PAPD4Q6PIY7 484 aaKnown RBP4.3□□□□□ -1.72
VPS8-219ENST00000469479 SUSD1Q6UWL2 747 aa4.3□□□□□ -1.72
VPS8-219ENST00000469479 RNF44Q7L0R7 432 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms