RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 PRRG2O14669 202 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 GLSO94925 669 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-205ENST00000468143 CBX7O95931 251 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 RFPL3SP0C7P2 107 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 ZNF844Q08AG5 666 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 NTRK2Q16620 822 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 KRT71Q3SY84 523 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 ARL13AQ5H913 290 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-205ENST00000468143 BICRALQ6AI39 1079 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 NOXRED1Q6NXP6 359 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 BNC2Q6ZN30 1099 aaPredicted RBP10.62□□□□□ -0.71
CDHR3-205ENST00000468143 SLC22A16Q86VW1 577 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 TICAM1Q8IUC6 712 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 OR2T11Q8NH01 316 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 DIO2Q92813 273 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 GFM2Q969S9 779 aaKnown RBP10.62□□□□□ -0.71
CDHR3-205ENST00000468143 CTHRC1Q96CG8 243 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 EGLN2Q96KS0 407 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 TMEM109Q9BVC6 243 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 ITPAQ9BY32 194 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 TUBB1Q9H4B7 451 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 SLC35C2Q9NQQ7 365 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 TNFRSF10DQ9UBN6 386 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 EXO1Q9UQ84 846 aaKnown RBP10.62□□□□□ -0.71
CDHR3-205ENST00000468143 ENTPD4Q9Y227 616 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 CROCCQ5TZA2 2017 aa10.62□□□□□ -0.71
CDHR3-205ENST00000468143 WDR91A4D1P6 747 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 CAPN14A8MX76 684 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 PRSS44E7EML9 344 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 ADAM10O14672 748 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 RGS14O43566 566 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 RSL1D1O76021 490 aaKnown RBP10.61□□□□□ -0.71
CDHR3-205ENST00000468143 DDCP20711 480 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 TACR1P25103 407 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 ABCD3P28288 659 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 DCTP40126 519 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 EMDP50402 254 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 NRG3P56975 720 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 ZNF763Q0D2J5 394 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 SLC10A1Q14973 349 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 KIAA0040Q15053 153 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 ZNF628Q5EBL2 1059 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 KANK2Q63ZY3 851 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 SP5Q6BEB4 398 aaPredicted RBP10.61□□□□□ -0.71
CDHR3-205ENST00000468143 FAM71E1Q6IPT2 247 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 PAOXQ6QHF9 649 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 RGS9BPQ6ZS82 235 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 Q6ZSR9 355 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 CD163Q86VB7 1156 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 DDIASQ8IXT1 998 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 DND1Q8IYX4 353 aaKnown RBP10.61□□□□□ -0.71
CDHR3-205ENST00000468143 FBXW8Q8N3Y1 598 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 FAM109AQ8N4B1 249 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 MREGQ8N565 214 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 OR5M9Q8NGP3 310 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 FAM57AQ8TBR7 257 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 SPPL2AQ8TCT8 520 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 LCORQ96JN0 433 aaPredicted RBP10.61□□□□□ -0.71
CDHR3-205ENST00000468143 BBS4Q96RK4 519 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 DOHHQ9BU89 302 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 CENPHQ9H3R5 247 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 LDAHQ9H6V9 325 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 EXO5Q9H790 373 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 ZDHHC11Q9H8X9 412 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 LRTM1Q9HBL6 345 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 MIEF1Q9NQG6 463 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 PLSCR2Q9NRY7 297 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 GIMAP4Q9NUV9 329 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 EHD3Q9NZN3 535 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 CNIH4Q9P003 139 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 RAB21Q9UL25 225 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 TRAF6Q9Y4K3 522 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 DNAJC15Q9Y5T4 150 aa10.61□□□□□ -0.71
CDHR3-205ENST00000468143 C2orf72A6NCS6 295 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 TP53I11O14683 189 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 RGS16O15492 202 aaPredicted RBP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 CTIFO43310 598 aaKnown RBP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 AKAP10O43572 662 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 TYROBPO43914 113 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 NPHS1O60500 1241 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 CHEK2O96017 543 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 JUNP05412 331 aaKnown RBP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 ABCB1P08183 1280 aaPredicted RBP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 FGF4P08620 206 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 GRNP28799 593 aaKnown RBP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 ARRB2P32121 409 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 MPIP34949 423 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 CASP3P42574 277 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 NCBP2P52298 156 aaKnown RBP eCLIP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 RPS6KA2Q15349 733 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 CDSNQ15517 529 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 HYAL4Q2M3T9 481 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 UGT3A2Q3SY77 523 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 GALNTL6Q49A17 601 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 GXYLT1Q4G148 440 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 RFTN2Q52LD8 501 aaPredicted RBP10.6□□□□□ -0.71
CDHR3-205ENST00000468143 SH2D4BQ5SQS7 431 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 TMEM198Q66K66 360 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 ANKRD26P1Q6NSI1 321 aa10.6□□□□□ -0.71
CDHR3-205ENST00000468143 MTFR2Q6P444 385 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms