RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 INHBAP08476 426 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 FLYWCH1Q4VC44 716 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 EIPR1Q53HC9 387 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 FAM111BQ6SJ93 734 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 COMMD6Q7Z4G1 85 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 MILR1Q7Z6M3 343 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 MMP21Q8N119 569 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 VWA5B2Q8N398 1253 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 METTL4Q8N3J2 472 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 OR4F6Q8NGB9 312 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 RNASE6Q93091 150 aaKnown RBP19.26■□□□□ 0.67
COL9A3-207ENST00000467819 HSPBAP1Q96EW2 488 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 LRRC46Q96FV0 321 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 PRDM14Q9GZV8 571 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 ELOVL6Q9H5J4 265 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 METTL7AQ9H8H3 244 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 FARSBQ9NSD9 589 aaKnown RBP19.26■□□□□ 0.67
COL9A3-207ENST00000467819 BCAP29Q9UHQ4 241 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 TMCO1Q9UM00 188 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 IKBKGQ9Y6K9 419 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 ACANP16112 2415 aa19.26■□□□□ 0.67
COL9A3-207ENST00000467819 S1PR1P21453 382 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 TIMP3P35625 211 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 DEKP35659 375 aaKnown RBP19.25■□□□□ 0.67
COL9A3-207ENST00000467819 FEN1P39748 380 aaKnown RBP19.25■□□□□ 0.67
COL9A3-207ENST00000467819 PEX19P40855 299 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 ZNF136P52737 540 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 CKAP4Q07065 602 aaKnown RBP19.25■□□□□ 0.67
COL9A3-207ENST00000467819 EXOSC7Q15024 291 aaKnown RBP19.25■□□□□ 0.67
COL9A3-207ENST00000467819 WIPI1Q5MNZ9 446 aaPredicted RBP19.25■□□□□ 0.67
COL9A3-207ENST00000467819 DCST1Q5T197 706 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 FAM219BQ5XKK7 198 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 VASNQ6EMK4 673 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 DESI1Q6ICB0 168 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 C17orf47Q8NEP4 570 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 SLC44A1Q8WWI5 657 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 NINJ1Q92982 152 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 TMEM41AQ96HV5 264 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 TRIB1Q96RU8 372 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 ITPAQ9BY32 194 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 UGT2B28Q9BY64 529 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 RASSF1Q9NS23 344 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 MTRF1LQ9UGC7 380 aaKnown RBP19.25■□□□□ 0.67
COL9A3-207ENST00000467819 ST6GALNAC2Q9UJ37 374 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 PCDHA9Q9Y5H5 950 aa19.25■□□□□ 0.67
COL9A3-207ENST00000467819 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.25■□□□□ 0.67
COL9A3-207ENST00000467819 A0A1B0GTL3 188 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 C1orf226A1L170 272 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 GOLGA6L10A6NI86 522 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 PPM1BO75688 479 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 ABCB1P08183 1280 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-207ENST00000467819 BMP7P18075 431 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 TSPAN8P19075 237 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 MAGEA12P43365 314 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 AGFG1P52594 562 aaKnown RBP19.24■□□□□ 0.67
COL9A3-207ENST00000467819 CEBPEQ15744 281 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 TSNAXIP1Q2TAA8 658 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 PRICKLE4Q2TBC4 344 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 GGTA1PQ4G0N0 100 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 C10orf62Q5T681 223 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-207ENST00000467819 NSUN5P2Q63ZY6 315 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 SLC48A1Q6P1K1 146 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 ANGPTL8Q6UXH0 198 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 ADCY4Q8NFM4 1077 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 OR1J4Q8NGS1 313 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 ISL2Q96A47 359 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 RMND5BQ96G75 393 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-207ENST00000467819 PAFAH2Q99487 392 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 EPB41L4BQ9H329 900 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 CDC42EP4Q9H3Q1 356 aaKnown RBP19.24■□□□□ 0.67
COL9A3-207ENST00000467819 MAT2BQ9NZL9 334 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 ZNF629Q9UEG4 869 aaPredicted RBP19.24■□□□□ 0.67
COL9A3-207ENST00000467819 CES1P1Q9UKY3 287 aa19.24■□□□□ 0.67
COL9A3-207ENST00000467819 C2orf72A6NCS6 295 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 A6NNC1 897 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 PPP6CO00743 305 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 GUCY1B2O75343 617 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 PDYNP01213 254 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 RPS17P08708 135 aaKnown RBP19.23■□□□□ 0.67
COL9A3-207ENST00000467819 TACR1P25103 407 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 PTPN6P29350 595 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 MGAT2Q10469 447 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 SF3B4Q15427 424 aaKnown RBP eCLIP19.23■□□□□ 0.673e-6■■■□□ 16.8
COL9A3-207ENST00000467819 FBXL19-AS1Q494R0 122 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 NHSL2Q5HYW2 709 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 TIGD3Q6B0B8 471 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 FAM180BQ6P0A1 224 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 LETMD1Q6P1Q0 360 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 POMZP3Q6PJE2 187 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 TAOK1Q7L7X3 1001 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 YRDCQ86U90 279 aaKnown RBP19.23■□□□□ 0.67
COL9A3-207ENST00000467819 MED12LQ86YW9 2145 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 SIMC1Q8NDZ2 872 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 FAM83FQ8NEG4 500 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-207ENST00000467819 SELENOMQ8WWX9 145 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 ABTB1Q969K4 478 aaPredicted RBP19.23■□□□□ 0.67
COL9A3-207ENST00000467819 KLHL29Q96CT2 875 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 OMA1Q96E52 524 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 WDYHV1Q96HA8 205 aa19.23■□□□□ 0.67
COL9A3-207ENST00000467819 NODALQ96S42 347 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms