RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, human

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GAPVD1-211	ENST00000467707	LIME1	Q9H400	295 aa		4.09	□□□□□ -1.75
GAPVD1-211	ENST00000467707	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.09	□□□□□ -1.75
GAPVD1-211	ENST00000467707	NGB	Q9NPG2	151 aa		4.09	□□□□□ -1.75
GAPVD1-211	ENST00000467707	POLE3	Q9NRF9	147 aa		4.09	□□□□□ -1.75
GAPVD1-211	ENST00000467707	SOHLH2	Q9NX45	425 aa		4.09	□□□□□ -1.75
GAPVD1-211	ENST00000467707	EPS15L1	Q9UBC2	864 aa		4.09	□□□□□ -1.75
GAPVD1-211	ENST00000467707		A0A1W2PPR1	153 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707		E9PMD0	336 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	SGK494	L7N484	410 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	LGALS8	O00214	317 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	EI24	O14681	340 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	NUDT14	O95848	222 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	SLC35G4	P0C7Q5	338 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	HSD17B1	P14061	328 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	RPA1	P27694	616 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	PTPN6	P29350	595 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	PRDX2	P32119	198 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	CD86	P42081	329 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	CAMLG	P49069	296 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	SGSH	P51688	502 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	BNIP1	Q12981	228 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	SCGB2A2	Q13296	93 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	KARS	Q15046	597 aa	Known RBP	4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	LRIT3	Q3SXY7	679 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	TCHHL1	Q5QJ38	904 aa	Predicted RBP	4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	TAF3	Q5VWG9	929 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	LIPK	Q5VXJ0	399 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ARMCX5	Q6P1M9	558 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	EMB	Q6PCB8	327 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ATRAID	Q6UW56	229 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ABRAXAS1	Q6UWZ7	409 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	STOX1	Q6ZVD7	989 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	CATSPER4	Q7RTX7	472 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	KRTAP7-1	Q8IUC3	87 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ARL14	Q8N4G2	192 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	CERS5	Q8N5B7	392 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	MAPK1IP1L	Q8NDC0	245 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	WDR36	Q8NI36	951 aa	Known RBP	4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	FCGR1B	Q92637	280 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ST6GALNAC5	Q9BVH7	336 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	SALL1	Q9NSC2	1324 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ABCC13	Q9NSE7	274 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	SENP1	Q9P0U3	644 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	PURG	Q9UJV8	347 aa	Known RBP	4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	KLK13	Q9UKR3	277 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	IKZF3	Q9UKT9	509 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	DHRS7	Q9Y394	339 aa		4.08	□□□□□ -1.76
GAPVD1-211	ENST00000467707	NCAPD2	Q15021	1401 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	IGHV3-16	A0A0C4DH30	117 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	FOXI3	A8MTJ6	420 aa	Predicted RBP	4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	KRTAP16-1	A8MUX0	517 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	NPIPA2	E9PIF3	369 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707		H3BTX0	84 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ECD	O95905	644 aa	Predicted RBP	4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	IGHV3-13	P01766	116 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	HCK	P08631	526 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ETV5	P41161	510 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	PGF	P49763	221 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	SPP2	Q13103	211 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	CCL14	Q16627	93 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	HSP90AA5P	Q58FG0	334 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ARSK	Q6UWY0	536 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	UNC5D	Q6UXZ4	953 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ZNF841	Q6ZN19	808 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	BCORP1	Q8N888	145 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	RELL2	Q8NC24	303 aa	Predicted RBP	4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	FLVCR1-AS1	Q8TAF5	88 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	FICD	Q9BVA6	458 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ECT2	Q9H8V3	914 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	AMBN	Q9NP70	447 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	NRN1	Q9NPD7	142 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	KLHDC2	Q9Y2U9	406 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707		U3KQV3	271 aa		4.07	□□□□□ -1.76
GAPVD1-211	ENST00000467707	SNED1	Q8TER0	1413 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	TEX48	A0A1B0GUV7	120 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	FAM230A	A0A1W2PPH8	454 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707		F8WDY8	70 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	PDLIM1	O00151	329 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	GOT2	P00505	430 aa	Known RBP	4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	RRAS	P10301	218 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	PTMS	P20962	102 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	UCP1	P25874	307 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	RPL34	P49207	117 aa	Known RBP	4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	GSK3B	P49841	420 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	TRA2B	P62995	288 aa	Known RBP	4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	NOP14	P78316	857 aa	Known RBP	4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	KRTAP1-1	Q07627	177 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	FUT7	Q11130	342 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	PDZK1IP1	Q13113	114 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	CD226	Q15762	336 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	PCK2	Q16822	640 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ZNF699	Q32M78	642 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	LINC00242	Q5T6M2	205 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	ZNF343	Q6P1L6	599 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	DLX4	Q92988	240 aa	Predicted RBP	4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	BIRC7	Q96CA5	298 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	TBC1D31	Q96DN5	1066 aa		4.06	□□□□□ -1.76
GAPVD1-211	ENST00000467707	FAM173A	Q9BQD7	235 aa		4.06	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms