RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	WNT3	P56703	355 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	RAB38	P57729	211 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	TXNL4A	P83876	142 aa	Known RBP	11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	MAT1A	Q00266	395 aa	Known RBP	11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	TNFRSF17	Q02223	184 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	CEBPE	Q15744	281 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	SYT16	Q17RD7	645 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	DEFB134	Q4QY38	66 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	PAGE3	Q5JUK9	113 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	C6orf10	Q5SRN2	563 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	OR4F3	Q6IEY1	312 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	SLC48A1	Q6P1K1	146 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	DLEU7	Q6UYE1	221 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	TICAM1	Q8IUC6	712 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	FBXW8	Q8N3Y1	598 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	OR9A4	Q8NGU2	314 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	OR5P2	Q8WZ92	322 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	C8orf44	Q96CB5	159 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	SNRNP40	Q96DI7	357 aa	Known RBP	11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	THOC3	Q96J01	351 aa	Known RBP	11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	ANKRD27	Q96NW4	1050 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	CDRT15	Q96T59	188 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	WDR77	Q9BQA1	342 aa	Predicted RBP	11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	YIPF2	Q9BWQ6	316 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	SPATA9	Q9BWV2	254 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	ZNF160	Q9HCG1	818 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	SLC35C2	Q9NQQ7	365 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	KCMF1	Q9P0J7	381 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	TMEM181	Q9P2C4	612 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	ENTPD4	Q9Y227	616 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	L3MBTL1	Q9Y468	752 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	HECTD1	Q9ULT8	2610 aa		11.27	□□□□□ -0.61
CTNS-205	ENST00000467663	TRBV5-3	A0A0A0MS03	114 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	IGHV1-45	A0A0A0MS14	117 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	NSG1	A0A0A6YYJ2	146 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663		A0A1W2PR48	441 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	FXYD1	O00168	92 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	PDPK1	O15530	556 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	STATH	P02808	62 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	GBA	P04062	536 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	CYC1	P08574	325 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	RNH1	P13489	461 aa	Known RBP	11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	HSD17B1	P14061	328 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	ME2	P23368	584 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	SLC6A2	P23975	617 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	MPI	P34949	423 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	ALDH9A1	P49189	494 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	EFNA3	P52797	238 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	LIM2	P55344	173 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	KCNJ2	P63252	427 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	PHC1	P78364	1004 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	TRAP1	Q12931	704 aa	Known RBP	11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	BNIP2	Q12982	314 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	PIGG	Q5H8A4	983 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	BHLHB9	Q6PI77	547 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	SLC2A7	Q6PXP3	512 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	TMEM205	Q6UW68	189 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	ISLR2	Q6UXK2	745 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	PRSS41	Q7RTY9	318 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	NET1	Q7Z628	596 aa	Predicted RBP	11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	KBTBD2	Q8IY47	623 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	ULK2	Q8IYT8	1036 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	KIF2B	Q8N4N8	673 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	CISD2	Q8N5K1	135 aa	Known RBP	11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	PSMA8	Q8TAA3	256 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	ZCCHC10	Q8TBK6	192 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	PSMF1	Q92530	271 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	GFM2	Q969S9	779 aa	Known RBP	11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	MOAP1	Q96BY2	351 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	LMF1	Q96S06	567 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	BARD1	Q99728	777 aa	Known RBP	11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	MACROD1	Q9BQ69	325 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	SORBS1	Q9BX66	1292 aa	Known RBP	11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	PAIP1	Q9H074	479 aa	Known RBP	11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	ZNF700	Q9H0M5	742 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	RASSF4	Q9H2L5	321 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	EPS8L2	Q9H6S3	715 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	RPF2	Q9H7B2	306 aa	Known RBP	11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	SERHL	Q9NQF3	203 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	TAS2R9	Q9NYW1	312 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	SUCO	Q9UBS9	1254 aa	Known RBP	11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	FBXW2	Q9UKT8	454 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	MKL2	Q9ULH7	1088 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	NAALAD2	Q9Y3Q0	740 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	PCDHGA10	Q9Y5H3	936 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	ZNF780B	Q9Y6R6	833 aa		11.26	□□□□□ -0.61
CTNS-205	ENST00000467663	SPEN	Q96T58	3664 aa	Known RBP	11.25	□□□□□ -0.61
CTNS-205	ENST00000467663	PTPN13	Q12923	2485 aa		11.25	□□□□□ -0.61
CTNS-205	ENST00000467663		A0A0G2JN53	185 aa		11.25	□□□□□ -0.61
CTNS-205	ENST00000467663	C4orf51	C9J302	202 aa		11.25	□□□□□ -0.61
CTNS-205	ENST00000467663		C9JVG2	144 aa		11.25	□□□□□ -0.61
CTNS-205	ENST00000467663	CLDN4	O14493	209 aa		11.25	□□□□□ -0.61
CTNS-205	ENST00000467663	KRT75	O95678	551 aa		11.25	□□□□□ -0.61
CTNS-205	ENST00000467663	AIFM1	O95831	613 aa		11.25	□□□□□ -0.61
CTNS-205	ENST00000467663	SERPINA7	P05543	415 aa		11.25	□□□□□ -0.61
CTNS-205	ENST00000467663	ABCB1	P08183	1280 aa	Predicted RBP	11.25	□□□□□ -0.61
CTNS-205	ENST00000467663	CD1E	P15812	388 aa		11.25	□□□□□ -0.61
CTNS-205	ENST00000467663	IL1RN	P18510	177 aa		11.25	□□□□□ -0.61
CTNS-205	ENST00000467663	CSNK2A2	P19784	350 aa	Predicted RBP	11.25	□□□□□ -0.61
CTNS-205	ENST00000467663	ANXA11	P50995	505 aa	Known RBP	11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms