RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 TNFSF8P32971 234 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 BCL6P41182 706 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 WASP42768 502 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 GIPRP48546 466 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 ATAD3BQ5T9A4 648 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 RNLSQ5VYX0 342 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 TMEM64Q6YI46 380 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 USP30Q70CQ3 517 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 FAM20CQ8IXL6 584 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 CCDC116Q8IYX3 515 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 OR8H2Q8N162 312 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 FGF13Q92913 245 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 BADQ92934 168 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 PHPT1Q9NRX4 125 aaPredicted RBP17.27■□□□□ 0.36
SYNE4-204ENST00000465425 SNTG1Q9NSN8 517 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 C14orf119Q9NWQ9 140 aa17.27■□□□□ 0.36
SYNE4-204ENST00000465425 ZNF670-ZNF695F2Z2N8 137 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 HIST1H1TP22492 207 aaPredicted RBP17.27■□□□□ 0.35
SYNE4-204ENST00000465425 CRYBB2P43320 205 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 SMSP52788 366 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 IRF4Q15306 451 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 CST6Q15828 149 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 SNAPC1Q16533 368 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 SYT14P1Q58G82 188 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 KIAA1211LQ6NV74 962 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 PAQR6Q6TCH4 344 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 AICDAQ9GZX7 198 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 MAN2C1Q9NTJ4 1040 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 MOSPD1Q9UJG1 213 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 SLC13A4Q9UKG4 626 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 FBXW2Q9UKT8 454 aa17.27■□□□□ 0.35
SYNE4-204ENST00000465425 DIMT1Q9UNQ2 313 aaKnown RBP17.27■□□□□ 0.35
SYNE4-204ENST00000465425 HYKKA2RU49 373 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 WWP2O00308 870 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 PGRMC2O15173 223 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 CASC3O15234 703 aaKnown RBP17.26■□□□□ 0.35
SYNE4-204ENST00000465425 MYL12AP19105 171 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 GSTM3P21266 225 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 DMPKQ09013 629 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 TMEM240Q5SV17 173 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 C1orf94Q6P1W5 598 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 GDPD3Q7L5L3 318 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 OR2L8Q8NGY9 312 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 SFXN5Q8TD22 340 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 PRKAG2Q9UGJ0 569 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 ATG4BQ9Y4P1 393 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 HEATR5BQ9P2D3 2071 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 DENND4AQ7Z401 1863 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 CDH23Q9H251 3354 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 A0A0G2JPF8 293 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 HNRNPCL2B2RXH8 293 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 HNRNPCL3B7ZW38 293 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 KAT7O95251 611 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 FHP07954 510 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 HNRNPCL4P0DMR1 293 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 ACADMP11310 421 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 PRR5P85299 388 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 ACSM5Q6NUN0 579 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 TMEM107Q6UX40 140 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 GET4Q7L5D6 327 aaPredicted RBP17.26■□□□□ 0.35
SYNE4-204ENST00000465425 PHC2Q8IXK0 858 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 HDDC3Q8N4P3 179 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 ACOT4Q8N9L9 421 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 OR56A1Q8NGH5 318 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 OR52I1Q8NGK6 324 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 KLK6Q92876 244 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 MS4A6EQ96DS6 147 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 BARHL1Q9BZE3 327 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 TPK1Q9H3S4 243 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 ITGB1BP2Q9UKP3 347 aa17.26■□□□□ 0.35
SYNE4-204ENST00000465425 PRR23AA6NEV1 266 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 OR52A4PA6NMU1 304 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 SNTNA6NMZ2 147 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 C8orf89P0DMQ9 161 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 PKLRP30613 574 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 TRIM23P36406 574 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 TAS2R41P59536 307 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 LSM11P83369 360 aaKnown RBP eCLIP17.25■□□□□ 0.35
SYNE4-204ENST00000465425 ZNF750Q32MQ0 723 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 KLHL22Q53GT1 634 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 SLC25A30Q5SVS4 291 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 MORN4Q8NDC4 146 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 TEX47Q8TBZ9 253 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 MOAP1Q96BY2 351 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 CNRIP1Q96F85 164 aaPredicted RBP17.25■□□□□ 0.35
SYNE4-204ENST00000465425 ZNF582Q96NG8 517 aaPredicted RBP17.25■□□□□ 0.35
SYNE4-204ENST00000465425 PINK1Q9BXM7 581 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 SIAEQ9HAT2 523 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 A0A1W2PP55 124 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 A0A1W2PR48 441 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 C5orf67F2Z3F1 127 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 EPPINO95925 133 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 IFNGR2P38484 337 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 CDK5Q00535 292 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 FUT5Q11128 374 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 ENTPD8Q5MY95 495 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 ABHD17CQ6PCB6 329 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 TMPRSS11AQ6ZMR5 421 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 OR52E1Q8NGJ3 308 aa17.25■□□□□ 0.35
SYNE4-204ENST00000465425 GPR151Q8TDV0 419 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms