RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 VWFP04275 2813 aa8.44□□□□□ -1.06
APP-213ENST00000464867 IQANK1A0A1B0GTG1 560 aa8.44□□□□□ -1.06
APP-213ENST00000464867 TMEM89A2RUT3 159 aa8.44□□□□□ -1.06
APP-213ENST00000464867 E7EVH7 732 aa8.44□□□□□ -1.06
APP-213ENST00000464867 CDC7O00311 574 aa8.44□□□□□ -1.06
APP-213ENST00000464867 ETHE1O95571 254 aa8.44□□□□□ -1.06
APP-213ENST00000464867 TGFAP01135 160 aa8.44□□□□□ -1.06
APP-213ENST00000464867 CSF3P09919 207 aa8.44□□□□□ -1.06
APP-213ENST00000464867 HIST1H2AGP0C0S8 130 aaPredicted RBP8.44□□□□□ -1.06
APP-213ENST00000464867 HIST1H2ADP20671 130 aa8.44□□□□□ -1.06
APP-213ENST00000464867 HPDP32754 393 aaPredicted RBP8.44□□□□□ -1.06
APP-213ENST00000464867 KIR2DL2P43627 348 aaPredicted RBP8.44□□□□□ -1.06
APP-213ENST00000464867 TMED10P49755 219 aaKnown RBP8.44□□□□□ -1.06
APP-213ENST00000464867 SCGB2A2Q13296 93 aa8.44□□□□□ -1.06
APP-213ENST00000464867 RAB35Q15286 201 aa8.44□□□□□ -1.06
APP-213ENST00000464867 RBBP5Q15291 538 aaKnown RBP8.44□□□□□ -1.06
APP-213ENST00000464867 SLC18A3Q16572 532 aa8.44□□□□□ -1.06
APP-213ENST00000464867 CR1LQ2VPA4 569 aa8.44□□□□□ -1.06
APP-213ENST00000464867 ZNF672Q499Z4 452 aaPredicted RBP8.44□□□□□ -1.06
APP-213ENST00000464867 AGAP6Q5VW22 663 aa8.44□□□□□ -1.06
APP-213ENST00000464867 CASC4Q6P4E1 433 aa8.44□□□□□ -1.06
APP-213ENST00000464867 DNAJC14Q6Y2X3 702 aaPredicted RBP8.44□□□□□ -1.06
APP-213ENST00000464867 GPSM1Q86YR5 675 aa8.44□□□□□ -1.06
APP-213ENST00000464867 C9orf40Q8IXQ3 194 aa8.44□□□□□ -1.06
APP-213ENST00000464867 TMEM52Q8NDY8 209 aa8.44□□□□□ -1.06
APP-213ENST00000464867 LILRB1Q8NHL6 650 aaPredicted RBP8.44□□□□□ -1.06
APP-213ENST00000464867 KAT2AQ92830 837 aa8.44□□□□□ -1.06
APP-213ENST00000464867 GAL3ST3Q96A11 431 aa8.44□□□□□ -1.06
APP-213ENST00000464867 SNF8Q96H20 258 aa8.44□□□□□ -1.06
APP-213ENST00000464867 RBM18Q96H35 190 aaKnown RBP8.44□□□□□ -1.06
APP-213ENST00000464867 TMEM41AQ96HV5 264 aa8.44□□□□□ -1.06
APP-213ENST00000464867 HIST1H2AHQ96KK5 128 aa8.44□□□□□ -1.06
APP-213ENST00000464867 HIST1H2AJQ99878 128 aa8.44□□□□□ -1.06
APP-213ENST00000464867 H2AFJQ9BTM1 129 aa8.44□□□□□ -1.06
APP-213ENST00000464867 TRAF4Q9BUZ4 470 aaPredicted RBP8.44□□□□□ -1.06
APP-213ENST00000464867 ACTR6Q9GZN1 396 aa8.44□□□□□ -1.06
APP-213ENST00000464867 ANO10Q9NW15 660 aa8.44□□□□□ -1.06
APP-213ENST00000464867 GALPQ9UBC7 116 aa8.44□□□□□ -1.06
APP-213ENST00000464867 PTMAP06454 111 aaKnown RBP8.43□□□□□ -1.06
APP-213ENST00000464867 CETN2P41208 172 aa8.43□□□□□ -1.06
APP-213ENST00000464867 CASP3P42574 277 aa8.43□□□□□ -1.06
APP-213ENST00000464867 STARP49675 285 aa8.43□□□□□ -1.06
APP-213ENST00000464867 EEFSECP57772 596 aaKnown RBP8.43□□□□□ -1.06
APP-213ENST00000464867 ZBED6P86452 979 aa8.43□□□□□ -1.06
APP-213ENST00000464867 FUT7Q11130 342 aa8.43□□□□□ -1.06
APP-213ENST00000464867 CUL1Q13616 776 aa8.43□□□□□ -1.06
APP-213ENST00000464867 CYP1B1Q16678 543 aa8.43□□□□□ -1.06
APP-213ENST00000464867 PGGHGQ32M88 737 aa8.43□□□□□ -1.06
APP-213ENST00000464867 FNDC7Q5VTL7 733 aa8.43□□□□□ -1.06
APP-213ENST00000464867 BICRALQ6AI39 1079 aa8.43□□□□□ -1.06
APP-213ENST00000464867 SASS6Q6UVJ0 657 aa8.43□□□□□ -1.06
APP-213ENST00000464867 SBSNQ6UWP8 590 aa8.43□□□□□ -1.06
APP-213ENST00000464867 ANGPTL8Q6UXH0 198 aa8.43□□□□□ -1.06
APP-213ENST00000464867 ZNF525Q8N782 197 aa8.43□□□□□ -1.06
APP-213ENST00000464867 FAM71DQ8N9W8 422 aa8.43□□□□□ -1.06
APP-213ENST00000464867 SPPL2AQ8TCT8 520 aa8.43□□□□□ -1.06
APP-213ENST00000464867 LPGAT1Q92604 370 aa8.43□□□□□ -1.06
APP-213ENST00000464867 MSI2Q96DH6 328 aaKnown RBP8.43□□□□□ -1.06
APP-213ENST00000464867 DGAT2Q96PD7 388 aa8.43□□□□□ -1.06
APP-213ENST00000464867 FAM118BQ9BPY3 351 aa8.43□□□□□ -1.06
APP-213ENST00000464867 AIF1LQ9BQI0 150 aa8.43□□□□□ -1.06
APP-213ENST00000464867 G6PC3Q9BUM1 346 aa8.43□□□□□ -1.06
APP-213ENST00000464867 CCDC68Q9H2F9 335 aa8.43□□□□□ -1.06
APP-213ENST00000464867 METTL7AQ9H8H3 244 aa8.43□□□□□ -1.06
APP-213ENST00000464867 ACTR8Q9H981 624 aa8.43□□□□□ -1.06
APP-213ENST00000464867 COPS7BQ9H9Q2 264 aaPredicted RBP8.43□□□□□ -1.06
APP-213ENST00000464867 CHRAC1Q9NRG0 131 aa8.43□□□□□ -1.06
APP-213ENST00000464867 WWOXQ9NZC7 414 aa8.43□□□□□ -1.06
APP-213ENST00000464867 KLHL42Q9P2K6 505 aa8.43□□□□□ -1.06
APP-213ENST00000464867 NENFQ9UMX5 172 aa8.43□□□□□ -1.06
APP-213ENST00000464867 B3GALT5Q9Y2C3 310 aa8.43□□□□□ -1.06
APP-213ENST00000464867 MAD1L1Q9Y6D9 718 aa8.43□□□□□ -1.06
APP-213ENST00000464867 SPACA6W5XKT8 324 aa8.43□□□□□ -1.06
APP-213ENST00000464867 TRRAPQ9Y4A5 3859 aa8.43□□□□□ -1.06
APP-213ENST00000464867 PRR14LQ5THK1 2151 aa8.43□□□□□ -1.06
APP-213ENST00000464867 CADP27708 2225 aa8.42□□□□□ -1.06
APP-213ENST00000464867 A0A0G2JN53 185 aa8.42□□□□□ -1.06
APP-213ENST00000464867 BTNL10A8MVZ5 291 aa8.42□□□□□ -1.06
APP-213ENST00000464867 TRIM77I1YAP6 450 aa8.42□□□□□ -1.06
APP-213ENST00000464867 CYR61O00622 381 aa8.42□□□□□ -1.06
APP-213ENST00000464867 ERI3O43414 337 aaKnown RBP8.42□□□□□ -1.06
APP-213ENST00000464867 HCRTR2O43614 444 aa8.42□□□□□ -1.06
APP-213ENST00000464867 LDB3O75112 727 aa8.42□□□□□ -1.06
APP-213ENST00000464867 CBR3O75828 277 aa8.42□□□□□ -1.06
APP-213ENST00000464867 TJP3O95049 919 aa8.42□□□□□ -1.06
APP-213ENST00000464867 VENTXO95231 258 aa8.42□□□□□ -1.06
APP-213ENST00000464867 CGAP01215 116 aa8.42□□□□□ -1.06
APP-213ENST00000464867 APEHP13798 732 aaKnown RBP8.42□□□□□ -1.06
APP-213ENST00000464867 KRT15P19012 456 aa8.42□□□□□ -1.06
APP-213ENST00000464867 DEKP35659 375 aaKnown RBP8.42□□□□□ -1.06
APP-213ENST00000464867 CLCN7P51798 805 aa8.42□□□□□ -1.06
APP-213ENST00000464867 LIM2P55344 173 aa8.42□□□□□ -1.06
APP-213ENST00000464867 NRG3P56975 720 aa8.42□□□□□ -1.06
APP-213ENST00000464867 FBXW4P57775 412 aa8.42□□□□□ -1.06
APP-213ENST00000464867 BIKQ13323 160 aa8.42□□□□□ -1.06
APP-213ENST00000464867 GGTLC2Q14390 218 aa8.42□□□□□ -1.06
APP-213ENST00000464867 PCID2Q5JVF3 399 aa8.42□□□□□ -1.06
APP-213ENST00000464867 HLA-DQA1Q5Y7H0 255 aa8.42□□□□□ -1.06
APP-213ENST00000464867 LRRC8EQ6NSJ5 796 aa8.42□□□□□ -1.06
APP-213ENST00000464867 RNF111Q6ZNA4 994 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms