RNA–Protein interactions for RNA: ENST00000464012.1

CCHCR1-210, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 2

Gene CCHCR1, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-210ENST00000464012 ITPAQ9BY32 194 aa17.71■□□□□ 0.43
CCHCR1-210ENST00000464012 NXF5Q9H1B4 397 aaKnown RBP17.71■□□□□ 0.43
CCHCR1-210ENST00000464012 MID1IP1Q9NPA3 183 aa17.71■□□□□ 0.43
CCHCR1-210ENST00000464012 HEY2Q9UBP5 337 aa17.71■□□□□ 0.43
CCHCR1-210ENST00000464012 UTS2RQ9UKP6 389 aa17.71■□□□□ 0.43
CCHCR1-210ENST00000464012 ACAD8Q9UKU7 415 aa17.71■□□□□ 0.43
CCHCR1-210ENST00000464012 ZNF780BQ9Y6R6 833 aa17.71■□□□□ 0.43
CCHCR1-210ENST00000464012 A0A1B0GVC2 190 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 FIGNL2A6NMB9 653 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 SUSD5O60279 629 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 ATP1B1P05026 303 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 ENO1P06733 434 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 ENDOUP21128 410 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 S1PR1P21453 382 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 TRA2BP62995 288 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 RAE1P78406 368 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 ACSM2AQ08AH3 577 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 SPIN4Q56A73 249 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 WLSQ5T9L3 541 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 TMEM198Q66K66 360 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 ACSM2BQ68CK6 577 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 ZYG11AQ6WRX3 759 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 CCDC71Q8IV32 467 aaPredicted RBP17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 LRRC25Q8N386 305 aaPredicted RBP17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 CCDC63Q8NA47 563 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 SIMC1Q8NDZ2 872 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 CDC26Q8NHZ8 85 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 EPS8L3Q8TE67 593 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 ASB5Q8WWX0 329 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 EXOSC8Q96B26 276 aaKnown RBP17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 ALKBH4Q9NXW9 302 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 SPRR3Q9UBC9 169 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 B4GALT7Q9UBV7 327 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 DLGAP4Q9Y2H0 992 aa17.7■□□□□ 0.42
CCHCR1-210ENST00000464012 CCDC151A5D8V7 595 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 NKX2-6A6NCS4 301 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 G3V2L1 256 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 PROCP04070 461 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 PCSK2P16519 638 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 ACVR2AP27037 513 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 ABCD3P28288 659 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 CHRNB4P30926 498 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 MASP1P48740 699 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 FOXA1P55317 472 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 MRPS35P82673 323 aaKnown RBP17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 MGAT2Q10469 447 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 MAP4K2Q12851 820 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 DUSP8Q13202 625 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 TRMT12Q53H54 448 aaKnown RBP17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 SPDYAQ5MJ70 313 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 LIX1Q8N485 282 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 GBP7Q8N8V2 638 aaPredicted RBP17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 OR52R1Q8NGF1 315 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 OR10Q1Q8NGQ4 319 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 SPPL2AQ8TCT8 520 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 SARAFQ96BY9 339 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 CCDC126Q96EE4 140 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 RILPQ96NA2 401 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 TRIM8Q9BZR9 551 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 UCK2Q9BZX2 261 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 C12orf65Q9H3J6 166 aaKnown RBP17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 PLLPQ9Y342 182 aa17.69■□□□□ 0.42
CCHCR1-210ENST00000464012 UBFD1O14562 309 aaKnown RBP17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 HCN1O60741 890 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 CRCPO75575 148 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 CBX7O95931 251 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 TIA1P31483 386 aaKnown RBP eCLIP17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 TBCELQ5QJ74 424 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 DESI1Q6ICB0 168 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 B3GNT6Q6ZMB0 384 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 ACAD11Q709F0 780 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 CCDC116Q8IYX3 515 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 C16orf78Q8WTQ4 265 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 ZNF681Q96N22 645 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 SHCBP1LQ9BZQ2 653 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 ANKRA2Q9H9E1 313 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 RYDENQ9NUL5 291 aaKnown RBP17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 EHD3Q9NZN3 535 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 ZNF639Q9UID6 485 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 CFL2Q9Y281 166 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 FAM215AQ9Y5M1 114 aa17.68■□□□□ 0.42
CCHCR1-210ENST00000464012 TRIM3O75382 744 aaPredicted RBP17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 SOX18P35713 384 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 NAGLUP54802 743 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 RPP38P78345 283 aaKnown RBP17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 PLCXD2Q0VAA5 305 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 TOMM20Q15388 145 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 IMPG1Q17R60 797 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 CCDC153Q494R4 210 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 CFAP157Q5JU67 520 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 C1orf185Q5T7R7 199 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 RTL6Q6ICC9 239 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 MEX3BQ6ZN04 569 aaKnown RBP17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 CNPY4Q8N129 248 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 C4orf33Q8N1A6 199 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 EIF1ADQ8N9N8 165 aaKnown RBP17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 C17orf47Q8NEP4 570 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 NEIL3Q8TAT5 605 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 KAT2AQ92830 837 aa17.67■□□□□ 0.42
CCHCR1-210ENST00000464012 OMA1Q96E52 524 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms