RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 SLC16A11Q8NCK7 471 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 C1orf216Q8TAB5 229 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 PHF10Q8WUB8 498 aaKnown RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 APH1BQ8WW43 257 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 GUCD1Q96NT3 240 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 ALPK1Q96QP1 1244 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 ROGDIQ9GZN7 287 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 NAA50Q9GZZ1 169 aaKnown RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 SEMA6CQ9H3T2 930 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 TBC1D17Q9HA65 648 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 SLC24A3Q9HC58 644 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 UCKL1Q9NWZ5 548 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 RSL24D1Q9UHA3 163 aaKnown RBP12.03□□□□□ -0.48
VAPB-203ENST00000463370 SLC6A14Q9UN76 642 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 COMMD3-BMI1R4GMX3 469 aa12.03□□□□□ -0.48
VAPB-203ENST00000463370 TDRD6O60522 2096 aaKnown RBP12.02□□□□□ -0.48
VAPB-203ENST00000463370 TMEM247A6NEH6 219 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 M0R129 80 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 STK25O00506 426 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 WBP4O75554 376 aaKnown RBP12.02□□□□□ -0.49
VAPB-203ENST00000463370 PDE9AO76083 593 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 CPNE6O95741 557 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 CPMP14384 443 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 CDH3P22223 829 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 CSNK1EP49674 416 aaKnown RBP12.02□□□□□ -0.49
VAPB-203ENST00000463370 LSM11P83369 360 aaKnown RBP eCLIP12.02□□□□□ -0.49
VAPB-203ENST00000463370 PIN1Q13526 163 aaPredicted RBP12.02□□□□□ -0.49
VAPB-203ENST00000463370 MAD2L1BPQ15013 274 aaPredicted RBP12.02□□□□□ -0.49
VAPB-203ENST00000463370 ELOCQ15369 112 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 BROXQ5VW32 411 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 ZNF770Q6IQ21 691 aaPredicted RBP12.02□□□□□ -0.49
VAPB-203ENST00000463370 ARMC6Q6NXE6 501 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 BHLHB9Q6PI77 547 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 ENTHD1Q8IYW4 607 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 ARHGEF39Q8N4T4 335 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 C19orf47Q8N9M1 422 aaKnown RBP12.02□□□□□ -0.49
VAPB-203ENST00000463370 AQP11Q8NBQ7 271 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 SLC35A4Q96G79 324 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 PITX2Q99697 317 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 MAP3K3Q99759 626 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 CCDC3Q9BQI4 270 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 PRR14Q9BWN1 585 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 SLC38A1Q9H2H9 487 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 CHRDQ9H2X0 955 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 CXorf21Q9HAI6 301 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 BCL2L10Q9HD36 194 aa12.02□□□□□ -0.49
VAPB-203ENST00000463370 TMX2-CTNND1H3BSU7 103 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 FCMRO60667 390 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 RDH16O75452 317 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 SERPINB7O75635 380 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 CBLP22681 906 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 PPP2R1BP30154 601 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 CA13Q8N1Q1 262 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 CADM4Q8NFZ8 388 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 OR6T1Q8NGN1 323 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 OR9A4Q8NGU2 314 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 MOAP1Q96BY2 351 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 HRASLS5Q96KN8 279 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 RBCK1Q9BYM8 510 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 C3orf14Q9HBI5 128 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 CTPS2Q9NRF8 586 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 CHST2Q9Y4C5 530 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 FRS3O43559 492 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 TPST2O60704 377 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 CCNB2O95067 398 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 TLX1P31314 330 aaPredicted RBP12.01□□□□□ -0.49
VAPB-203ENST00000463370 KRT20P35900 424 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 FASLGP48023 281 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 PDX1P52945 283 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 GFERP55789 205 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 ESRRGP62508 458 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 NPTX1Q15818 432 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 FGD3Q5JSP0 725 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 MFSD12Q6NUT3 480 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 B3GNT6Q6ZMB0 384 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 USP53Q70EK8 1073 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 VRK2Q86Y07 508 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 RBM12BQ8IXT5 1001 aaKnown RBP12.01□□□□□ -0.49
VAPB-203ENST00000463370 OR2L13Q8N349 312 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 SETD9Q8NE22 299 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 BBS10Q8TAM1 723 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 ISOC1Q96CN7 298 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 MPP4Q96JB8 637 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 ACTRT3Q9BYD9 372 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 LYRM4Q9HD34 91 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 PTTG2Q9NZH5 202 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 A4GNTQ9UNA3 340 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 DOLKQ9UPQ8 538 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 RNF6Q9Y252 685 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 GPR55Q9Y2T6 319 aaPredicted RBP12.01□□□□□ -0.49
VAPB-203ENST00000463370 HCN4Q9Y3Q4 1203 aa12.01□□□□□ -0.49
VAPB-203ENST00000463370 HEMK1Q9Y5R4 338 aaPredicted RBP12.01□□□□□ -0.49
VAPB-203ENST00000463370 A0A1W2PPC1 479 aa12□□□□□ -0.49
VAPB-203ENST00000463370 CASC3O15234 703 aaKnown RBP12□□□□□ -0.49
VAPB-203ENST00000463370 ANXA8P13928 327 aa12□□□□□ -0.49
VAPB-203ENST00000463370 ELAVL4P26378 380 aaKnown RBP12□□□□□ -0.49
VAPB-203ENST00000463370 CAPZBP47756 277 aa12□□□□□ -0.49
VAPB-203ENST00000463370 MAPK10P53779 464 aa12□□□□□ -0.49
VAPB-203ENST00000463370 ZP2Q05996 745 aa12□□□□□ -0.49
VAPB-203ENST00000463370 LSAMPQ13449 338 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms