RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 SOX11P35716 441 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 PGGT1BP53609 377 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 PTPN5P54829 565 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 RAG2P55895 527 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 DMWDQ09019 674 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 RPA4Q13156 261 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 SSX1Q16384 188 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 NHLRC3Q5JS37 347 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 ALG1LQ6GMV1 187 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 GDPD4Q6W3E5 623 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 RIT1Q92963 219 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 SGK3Q96BR1 496 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 LINC00052Q96N35 136 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 ATOH8Q96SQ7 321 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 CNPPD1Q9BV87 410 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 ASIC5Q9NY37 505 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 USP36Q9P275 1121 aaKnown RBP10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 UTS2RQ9UKP6 389 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 FZD4Q9ULV1 537 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 TMEM5Q9Y2B1 443 aa10.89□□□□□ -0.67
TRAPPC3-205ENST00000462715 OR6C65A6NJZ3 312 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 INSIG1O15503 277 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 KLK8O60259 260 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 PRAMEF1O95521 474 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 HLA-DQB2P05538 268 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 MTHFD2P13995 350 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 TSPAN8P19075 237 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 CRYBB2P43320 205 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 RGRP47804 291 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 MAXP61244 160 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 BCL2L1Q07817 233 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 FGFBP1Q14512 234 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 GTDC1Q4AE62 458 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 ZNF805Q5CZA5 627 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 ADGRF3Q8IZF5 1079 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 PGBD5Q8N414 524 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 HDDC3Q8N4P3 179 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 OR4A15Q8NGL6 344 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 OR2T4Q8NH00 348 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 ZBED6CLQ96FA7 236 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 SCMH1Q96GD3 660 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 ERMAPQ96PL5 475 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 SEMA3CQ99985 751 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 DPCDQ9BVM2 203 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 ZNF275Q9NSD4 429 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 PFDN2Q9UHV9 154 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 ABCG2Q9UNQ0 655 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 WDFY4Q6ZS81 3184 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 A0A1W2PQL4 384 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 SLC22A23A1A5C7 686 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 CASC3O15234 703 aaKnown RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 SOCS5O75159 536 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 RPP40O75818 363 aaKnown RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 IGLV3-19P01714 112 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 FGF2P09038 288 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 CR2P20023 1033 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 GKP32189 559 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 ADRA1AP35348 466 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 RORAP35398 523 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 P2RY2P41231 377 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 TSNQ15631 228 aaKnown RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 LRIF1Q5T3J3 769 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 RGS7BPQ6MZT1 257 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 MS4A15Q8N5U1 240 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 PRSS33Q8NF86 280 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 OR56A4Q8NGH8 313 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 CLHC1Q8NHS4 586 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 STAG3L4Q8TBR4 150 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 TMEM163Q8TC26 289 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 ZNF419Q96HQ0 510 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 PPP3R2Q96LZ3 170 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 HDAC8Q9BY41 377 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 SAV1Q9H4B6 383 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 NDUFB11Q9NX14 153 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 GPN3Q9UHW5 284 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 SCP2D1Q9UJQ7 156 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 CYP8B1Q9UNU6 501 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 DTX4Q9Y2E6 619 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 POFUT2Q9Y2G5 429 aa10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 SAMHD1Q9Y3Z3 626 aaKnown RBP10.88□□□□□ -0.67
TRAPPC3-205ENST00000462715 A0A1W2PP55 124 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 MMP20O60882 483 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 PSIP1O75475 530 aaKnown RBP10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 TP53P04637 393 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 HSPA7P48741 367 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 GTF2H3Q13889 308 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 MAPKAPK3Q16644 382 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 POM121L1PQ3SYA9 428 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 LGALSLQ3ZCW2 172 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 FLYWCH1Q4VC44 716 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 PLAG1Q6DJT9 500 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 NCEH1Q6PIU2 408 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 SLC36A4Q6YBV0 504 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 MCATQ8IVS2 390 aaKnown RBP10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 SLC44A2Q8IWA5 706 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 NETO1Q8TDF5 533 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 FAM120BQ96EK7 910 aaKnown RBP10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 BBS4Q96RK4 519 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 KCNA7Q96RP8 456 aa10.87□□□□□ -0.67
TRAPPC3-205ENST00000462715 CPPED1Q9BRF8 314 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms