RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 RASAL1O95294 804 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 PDGFAP04085 211 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 P04436 131 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 SP1P08047 785 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 NXNQ6DKJ4 435 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 CCDC116Q8IYX3 515 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 KIF2BQ8N4N8 673 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 OR8J2Q8NGG1 315 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 SPACA9Q96E40 222 aaPredicted RBP9.91□□□□□ -0.82
UBR4-208ENST00000459947 BTBD9Q96Q07 612 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 RASL10BQ96S79 203 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 PTGDR2Q9Y5Y4 395 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 KMT2BQ9UMN6 2715 aaPredicted RBP9.91□□□□□ -0.82
UBR4-208ENST00000459947 HS6ST1O60243 411 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 AGR2O95994 175 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 GPX3P22352 226 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 CD96P40200 585 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 KIR3DL1P43629 444 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 RBPJQ06330 500 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 MGAT2Q10469 447 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 ZNF155Q12901 538 aaPredicted RBP9.91□□□□□ -0.82
UBR4-208ENST00000459947 TP53BP2Q13625 1128 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 CYP27C1Q4G0S4 372 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 TRIML2Q8N7C3 387 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 PSMA8Q8TAA3 256 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 OIT3Q8WWZ8 545 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 C3orf30Q96M34 536 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 MS4A4EQ96PG1 132 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 RMND5AQ9H871 391 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 A0A1W2PRB8 838 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 RNASET2O00584 256 aaKnown RBP9.91□□□□□ -0.82
UBR4-208ENST00000459947 UBDO15205 165 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 AKAP10O43572 662 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 SLC25A12O75746 678 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 EPGNQ6UW88 154 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 C9orf40Q8IXQ3 194 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 OR2L13Q8N349 312 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 CDRT4Q8N9R6 151 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 OR52R1Q8NGF1 315 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 GLIPR2Q9H4G4 154 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 Q9N2J8 555 aa9.91□□□□□ -0.82
UBR4-208ENST00000459947 ATP6AP2A0A1C7CYW4 349 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 ANKRD33BA6NCL7 494 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 ATP6AP2O75787 350 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 AK1P00568 194 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 TACR1P25103 407 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 S100A3P33764 101 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 CLK3P49761 638 aaKnown RBP9.9□□□□□ -0.82
UBR4-208ENST00000459947 COL9A2Q14055 689 aaPredicted RBP9.9□□□□□ -0.82
UBR4-208ENST00000459947 ELOAQ14241 798 aaKnown RBP9.9□□□□□ -0.82
UBR4-208ENST00000459947 RIMKLAQ8IXN7 391 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 EID3Q8N140 333 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 FBXW8Q8N3Y1 598 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 OR9A2Q8NGT5 310 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 C1orf50Q9BV19 199 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 TCF7L2Q9NQB0 619 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 ZNF446Q9NWS9 450 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 QPCTLQ9NXS2 382 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 BTNL2Q9UIR0 455 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 BOKQ9UMX3 212 aaPredicted RBP9.9□□□□□ -0.82
UBR4-208ENST00000459947 CBX7O95931 251 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 IL6P05231 212 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 G6PDP11413 515 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 ENDOUP21128 410 aaKnown RBP9.9□□□□□ -0.82
UBR4-208ENST00000459947 CD97P48960 835 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 MAPKAPK3Q16644 382 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 NADK2Q4G0N4 442 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 KRTCAP3Q53RY4 240 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 CES4AQ5XG92 561 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 PRICKLE2Q7Z3G6 844 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 PTRH1Q86Y79 214 aaKnown RBP9.9□□□□□ -0.82
UBR4-208ENST00000459947 MIER2Q8N344 545 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 CPT1CQ8TCG5 803 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 TMCO6Q96DC7 493 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 ELP4Q96EB1 424 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 FAM173AQ9BQD7 235 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 LMF2Q9BU23 707 aaKnown RBP9.9□□□□□ -0.82
UBR4-208ENST00000459947 NSRP1Q9H0G5 558 aaKnown RBP9.9□□□□□ -0.82
UBR4-208ENST00000459947 RAD21L1Q9H4I0 556 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 FOLH1BQ9HBA9 442 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 B4GALT7Q9UBV7 327 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 DOCK10Q96BY6 2186 aa9.9□□□□□ -0.82
UBR4-208ENST00000459947 TNRC6AQ8NDV7 1962 aaKnown RBP9.9□□□□□ -0.82
UBR4-208ENST00000459947 EDF1O60869 148 aaKnown RBP9.9□□□□□ -0.83
UBR4-208ENST00000459947 DIAPH2O60879 1101 aa9.9□□□□□ -0.83
UBR4-208ENST00000459947 OR2J2O76002 312 aa9.9□□□□□ -0.83
UBR4-208ENST00000459947 EDN3P14138 238 aa9.9□□□□□ -0.83
UBR4-208ENST00000459947 S1PR1P21453 382 aa9.9□□□□□ -0.83
UBR4-208ENST00000459947 NTRK2Q16620 822 aa9.9□□□□□ -0.83
UBR4-208ENST00000459947 PLEKHN1Q494U1 663 aaPredicted RBP9.9□□□□□ -0.83
UBR4-208ENST00000459947 METTL21CQ5VZV1 264 aa9.9□□□□□ -0.83
UBR4-208ENST00000459947 SLC22A10Q63ZE4 541 aa9.9□□□□□ -0.83
UBR4-208ENST00000459947 C16orf52Q8NHV5 167 aa9.9□□□□□ -0.83
UBR4-208ENST00000459947 MFRPQ9BY79 579 aa9.9□□□□□ -0.83
UBR4-208ENST00000459947 C20orf27Q9GZN8 174 aa9.9□□□□□ -0.83
UBR4-208ENST00000459947 NPFFR2Q9Y5X5 522 aa9.9□□□□□ -0.83
UBR4-208ENST00000459947 ASPDHA6ND91 283 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 ERN1O75460 977 aaKnown RBP9.89□□□□□ -0.83
UBR4-208ENST00000459947 PPM1BO75688 479 aa9.89□□□□□ -0.83
UBR4-208ENST00000459947 SNX4O95219 450 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms