RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 SERTAD2Q14140 314 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 FKBP9P1Q75LS8 142 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 BPHLQ86WA6 291 aaPredicted RBP22.84■■□□□ 1.25
U2AF1-204ENST00000459639 EDEM2Q9BV94 578 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 CNOT11Q9UKZ1 510 aaKnown RBP22.84■■□□□ 1.25
U2AF1-204ENST00000459639 DUXAA6NLW8 204 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 M0QX08 132 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 PGM3O95394 542 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 AGR2O95994 175 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 NR2F1P10589 423 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 CSTF2P33240 577 aaKnown RBP eCLIP22.84■■□□□ 1.25
U2AF1-204ENST00000459639 STT3AP46977 705 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 ARHGAP40Q5TG30 622 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 NAXDQ8IW45 347 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 SLC44A2Q8IWA5 706 aaPredicted RBP22.84■■□□□ 1.25
U2AF1-204ENST00000459639 GALNT12Q8IXK2 581 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 VWA5B2Q8N398 1253 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 ICA1LQ8NDH6 482 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 OR10Q1Q8NGQ4 319 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 LZICQ8WZA0 190 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 RBM18Q96H35 190 aaKnown RBP22.84■■□□□ 1.25
U2AF1-204ENST00000459639 DGAT2Q96PD7 388 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 YIPF2Q9BWQ6 316 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 SLC7A5P2Q9GIP4 190 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 VCXQ9H320 206 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 CXorf21Q9HAI6 301 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 IL1RAPQ9NPH3 570 aa22.84■■□□□ 1.25
U2AF1-204ENST00000459639 GPR179Q6PRD1 2367 aa22.83■■□□□ 1.25
U2AF1-204ENST00000459639 PRAMEF27A3QJZ7 478 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 TMEM229AB2RXF0 380 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 HYAL3O43820 417 aaPredicted RBP22.83■■□□□ 1.24
U2AF1-204ENST00000459639 PRSS23O95084 383 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 OPN1SWP03999 348 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 CT62P0C5K7 136 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 MAOAP21397 527 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 GALNSP34059 522 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 CRISP3P54108 245 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 FUT5Q11128 374 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 SYPL1Q16563 259 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 RPS26P11Q5JNZ5 115 aaPredicted RBP22.83■■□□□ 1.24
U2AF1-204ENST00000459639 PRAMEF8Q5VWM4 474 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 PRAMEF7Q5VXH5 474 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 ZCCHC12Q6PEW1 402 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 QSOX2Q6ZRP7 698 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 VTCN1Q7Z7D3 282 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 ZDHHC21Q8IVQ6 265 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 C7orf57Q8NEG2 295 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 BBS10Q8TAM1 723 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 ATOH1Q92858 354 aaPredicted RBP22.83■■□□□ 1.24
U2AF1-204ENST00000459639 TPD52L3Q96J77 140 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 TMEM9BQ9NQ34 198 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 DNAJB9Q9UBS3 223 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 LIPT1Q9Y234 373 aa22.83■■□□□ 1.24
U2AF1-204ENST00000459639 VPS13AQ96RL7 3174 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 ASCC3Q8N3C0 2202 aaKnown RBP22.82■■□□□ 1.24
U2AF1-204ENST00000459639 JRKO75564 520 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 HBQ1P09105 142 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 SFT2D3Q587I9 215 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 EXOSC6Q5RKV6 272 aaKnown RBP22.82■■□□□ 1.24
U2AF1-204ENST00000459639 ATAD3BQ5T9A4 648 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 C1orf189Q5VU69 101 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 DGAT2L6Q6ZPD8 337 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 B3GNT8Q7Z7M8 397 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 AGBL5Q8NDL9 886 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 ADAMTS15Q8TE58 950 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 RIT1Q92963 219 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 OTUB1Q96FW1 271 aaPredicted RBP22.82■■□□□ 1.24
U2AF1-204ENST00000459639 ZNF607Q96SK3 696 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 TREX2Q9BQ50 279 aaPredicted RBP22.82■■□□□ 1.24
U2AF1-204ENST00000459639 BCL2L10Q9HD36 194 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 ADAP2Q9NPF8 381 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 MKKSQ9NPJ1 570 aaPredicted RBP22.82■■□□□ 1.24
U2AF1-204ENST00000459639 ZNF639Q9UID6 485 aa22.82■■□□□ 1.24
U2AF1-204ENST00000459639 COQ9O75208 318 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 SCRG1O75711 98 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 CST1P01037 141 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 FABP3P05413 133 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 KCNJ10P78508 379 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 PPP1R3BQ86XI6 285 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 SIMC1Q8NDZ2 872 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 CIB1Q99828 191 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 NECTIN3Q9NQS3 549 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 EXD2Q9NVH0 621 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 OCIAD1Q9NX40 245 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 FGF5P12034 268 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 AQP4P55087 323 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 IL11RAQ14626 422 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 IFI44LQ53G44 452 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 HEPHL1Q6MZM0 1159 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 PWWP2BQ6NUJ5 590 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 PIWIL3Q7Z3Z3 882 aaKnown RBP22.81■■□□□ 1.24
U2AF1-204ENST00000459639 ARMC8Q8IUR7 673 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 CDRT4Q8N9R6 151 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 VPS50Q96JG6 964 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 ZNF578Q96N58 590 aaPredicted RBP22.81■■□□□ 1.24
U2AF1-204ENST00000459639 C9orf16Q9BUW7 83 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 BTBD2Q9BX70 525 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 C8orf4Q9NR00 106 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 GIN1Q9NXP7 522 aa22.81■■□□□ 1.24
U2AF1-204ENST00000459639 CALML5Q9NZT1 146 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms