RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ZNF583Q96ND8 569 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 QKIQ96PU8 341 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS41-209ENST00000457055 HAPLN3Q96S86 360 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 NPAS2Q99743 824 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 HIST1H2AJQ99878 128 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 PRRT1Q99946 306 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 C17orf62Q9BQA9 187 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 TIPINQ9BVW5 301 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 ZNF717Q9BY31 904 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 EGLN1Q9GZT9 426 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 CLPBQ9H078 707 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 MAGT1Q9H0U3 335 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 HIPK2Q9H2X6 1198 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 C10orf88Q9H8K7 445 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 ACTR8Q9H981 624 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 NMUR1Q9HB89 426 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 APMAPQ9HDC9 416 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.1□□□□□ -1.59
VPS41-209ENST00000457055 ING3Q9NXR8 418 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 ALKBH4Q9NXW9 302 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 HAO2Q9NYQ3 351 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 ARPP21Q9UBL0 812 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 SCN11AQ9UI33 1791 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 CDH22Q9UJ99 828 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 AJAP1Q9UKB5 411 aaPredicted RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 AGO1Q9UL18 857 aaKnown RBP5.1□□□□□ -1.59
VPS41-209ENST00000457055 FLVCR2Q9UPI3 526 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 NPTNQ9Y639 398 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 CPQQ9Y646 472 aa5.1□□□□□ -1.59
VPS41-209ENST00000457055 ADAMTSL1Q8N6G6 1762 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 ADGRB1O14514 1584 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 LOC102723996A0A087X1L8 192 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 FAM90A18PA6NE21 464 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 FAM90A16PA6NEW6 464 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 FABP12A6NFH5 140 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 FAM90A20PA6NIJ5 464 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 FAM90A9PA6NNJ1 464 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 FAM90A5PA8MXJ8 464 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 KCNU1A8MYU2 1149 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 KLRC4-KLRK1H3BQV0 150 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 PYCARD-AS1I3L0S3 204 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 TCAPO15273 167 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 DUX1O43812 170 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 SLC28A2O43868 658 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 DPM1O60762 260 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 CTNSO60931 367 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 CSO75390 466 aaKnown RBP5.09□□□□□ -1.59
VPS41-209ENST00000457055 GATBO75879 557 aaKnown RBP5.09□□□□□ -1.59
VPS41-209ENST00000457055 CELF2O95319 508 aaKnown RBP5.09□□□□□ -1.59
VPS41-209ENST00000457055 TRUB2O95900 331 aaKnown RBP5.09□□□□□ -1.59
VPS41-209ENST00000457055 SERPINB2P05120 415 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 GUSBP08236 651 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 FAM90A15PP0C7V4 464 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 FAM90A14PP0C7W9 464 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 GIMD1P0DJR0 217 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 COX7A2P14406 83 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 CD36P16671 472 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 ZNF18P17022 549 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 ZNF8P17098 575 aaPredicted RBP5.09□□□□□ -1.59
VPS41-209ENST00000457055 PSMC3P17980 439 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 GSTM3P21266 225 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 DPP4P27487 766 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 MPIP34949 423 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 VIPR2P41587 438 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 CCR8P51685 355 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 MAPK12P53778 367 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 PNLIPRP2P54317 469 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 LGALS4P56470 323 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 SOX8P57073 446 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 CDK16Q00536 496 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 HLXQ14774 488 aaPredicted RBP5.09□□□□□ -1.59
VPS41-209ENST00000457055 STXBP2Q15833 593 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 SNAPC1Q16533 368 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 EXOC3L2Q2M3D2 409 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 EDRF1Q3B7T1 1238 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 DPCR1Q3MIW9 517 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 KHDC1Q4VXA5 237 aaKnown RBP5.09□□□□□ -1.59
VPS41-209ENST00000457055 RUNDC3AQ59EK9 446 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 XKR7Q5GH72 579 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 EPHA10Q5JZY3 1008 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 CBWD5Q5RIA9 395 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 TMEM108Q6UXF1 575 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 SERPINA13PQ6UXR4 307 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 Q6ZNX1 250 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 TFAP2DQ7Z6R9 452 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 ABI3BPQ7Z7G0 1075 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 CENPVQ7Z7K6 275 aaPredicted RBP5.09□□□□□ -1.59
VPS41-209ENST00000457055 TMEM17Q86X19 198 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 HPS6Q86YV9 775 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 ZBED8Q8IZ13 594 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 ADGRG5Q8IZF4 528 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 GCNT2Q8N0V5 402 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 ZNF561Q8N587 486 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 ALLCQ8N6M5 410 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 PQLC3Q8N755 202 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 GATSQ8NAP1 163 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 CYB561A3Q8NBI2 242 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 FAM71CQ8NEG0 241 aa5.09□□□□□ -1.59
VPS41-209ENST00000457055 FAM83FQ8NEG4 500 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms