RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 MCATQ8IVS2 390 aaKnown RBP14.96□□□□□ -0.01
SNX17-204ENST00000453453 DNAJC22Q8N4W6 341 aa14.96□□□□□ -0.01
SNX17-204ENST00000453453 CSNK1A1LQ8N752 337 aa14.96□□□□□ -0.01
SNX17-204ENST00000453453 CLHC1Q8NHS4 586 aa14.96□□□□□ -0.01
SNX17-204ENST00000453453 SGCDQ92629 289 aa14.96□□□□□ -0.01
SNX17-204ENST00000453453 FAM162AQ96A26 154 aa14.96□□□□□ -0.01
SNX17-204ENST00000453453 C17orf62Q9BQA9 187 aa14.96□□□□□ -0.01
SNX17-204ENST00000453453 FAM60AQ9NP50 221 aa14.96□□□□□ -0.01
SNX17-204ENST00000453453 LOC105369274A0A096LPK9 316 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 LOC102723532A0A0G2JNH3 316 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 RGS10O43665 173 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 IL6P05231 212 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 GP1BAP07359 652 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 EFNA1P20827 205 aaPredicted RBP14.95□□□□□ -0.02
SNX17-204ENST00000453453 BSGP35613 385 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 MAPK12P53778 367 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 ZNF45Q02386 682 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 CD300CQ08708 224 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 HYAL2Q12891 473 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 NPTX1Q15818 432 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 RUNDC3AQ59EK9 446 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 UBE2UQ5VVX9 321 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 ZBTB46Q86UZ6 589 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 CALHM3Q86XJ0 350 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 NAXDQ8IW45 347 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 OR4N4Q8N0Y3 316 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 OR4D9Q8NGE8 314 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 NDNFQ8TB73 568 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 GFM1Q96RP9 751 aaKnown RBP14.95□□□□□ -0.02
SNX17-204ENST00000453453 MACROD1Q9BQ69 325 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 NUDT22Q9BRQ3 303 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 NXF2Q9GZY0 626 aaKnown RBP14.95□□□□□ -0.02
SNX17-204ENST00000453453 HOXD1Q9GZZ0 328 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 KLHL31Q9H511 634 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 ACTL8Q9H568 366 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 FAM86C1Q9NVL1 165 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 CCDC59Q9P031 241 aaKnown RBP14.95□□□□□ -0.02
SNX17-204ENST00000453453 SEMA5BQ9P283 1151 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 ZNF229Q9UJW7 825 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 WBP11Q9Y2W2 641 aaKnown RBP14.95□□□□□ -0.02
SNX17-204ENST00000453453 PMF1-BGLAPU3KQ54 211 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 ASXL3Q9C0F0 2248 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 CDX4O14627 284 aaPredicted RBP14.95□□□□□ -0.02
SNX17-204ENST00000453453 P2RX6O15547 441 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 ASNA1O43681 348 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 SNX4O95219 450 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 IGFBP5P24593 272 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 TACR1P25103 407 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 RPL3P39023 403 aaKnown RBP14.95□□□□□ -0.02
SNX17-204ENST00000453453 SEPHS1P49903 392 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 TPTEP56180 551 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 IL5RAQ01344 420 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 CFHR1Q03591 330 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 NKG7Q16617 165 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 DEFB110Q30KQ9 67 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 TCTE1Q5JU00 501 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 ATAD3BQ5T9A4 648 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 ABHD17CQ6PCB6 329 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 ENPP6Q6UWR7 440 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 IKBIPQ70UQ0 350 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 LYSMD2Q8IV50 215 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 TMEM132CQ8N3T6 1108 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 FBXO30Q8TB52 745 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 FIG4Q92562 907 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 SIGLEC11Q96RL6 698 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 PITX2Q99697 317 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 SORBS1Q9BX66 1292 aaKnown RBP14.95□□□□□ -0.02
SNX17-204ENST00000453453 CCDC90BQ9GZT6 254 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 DDX31Q9H8H2 851 aaKnown RBP14.95□□□□□ -0.02
SNX17-204ENST00000453453 MYNNQ9NPC7 610 aa14.95□□□□□ -0.02
SNX17-204ENST00000453453 ATXN7L1Q9ULK2 861 aaPredicted RBP14.95□□□□□ -0.02
SNX17-204ENST00000453453 GPR179Q6PRD1 2367 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 TRBV5-3A0A0A0MS03 114 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 RTCAO00442 366 aaKnown RBP14.94□□□□□ -0.02
SNX17-204ENST00000453453 DYRK3O43781 588 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 GUCY1B2O75343 617 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 ERN1O75460 977 aaKnown RBP14.94□□□□□ -0.02
SNX17-204ENST00000453453 ZNF888P0CJ79 500 aaPredicted RBP14.94□□□□□ -0.02
SNX17-204ENST00000453453 CD59P13987 128 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 DDX5P17844 614 aaKnown RBP14.94□□□□□ -0.02
SNX17-204ENST00000453453 ACP1P24666 158 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 RAB8AP61006 207 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 TRA2BP62995 288 aaKnown RBP14.94□□□□□ -0.02
SNX17-204ENST00000453453 SKP1P63208 163 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 PRKCDQ05655 676 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 NDUFA9Q16795 377 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 HKDC1Q2TB90 917 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 UBE3DQ7Z6J8 389 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 B3GNT8Q7Z7M8 397 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 KCT2Q8NC54 265 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 MCFD2Q8NI22 146 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 ZCCHC10Q8TBK6 192 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 UTP15Q8TED0 518 aaKnown RBP14.94□□□□□ -0.02
SNX17-204ENST00000453453 C16orf78Q8WTQ4 265 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 GTF2H4Q92759 462 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 SLC38A4Q969I6 547 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 ZNF768Q9H5H4 540 aaKnown RBP14.94□□□□□ -0.02
SNX17-204ENST00000453453 CLMPQ9H6B4 373 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 SYNPO2LQ9H987 977 aa14.94□□□□□ -0.02
SNX17-204ENST00000453453 ACOT13Q9NPJ3 140 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms