RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 TFECO14948 347 aaPredicted RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 PDPK1O15530 556 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 ITM2AO43736 263 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 PEX1O43933 1283 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 PEX11AO75192 247 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 COQ9O75208 318 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 NADKO95544 446 aaPredicted RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 CBX7O95931 251 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 P04436 131 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 FBXO45P0C2W1 286 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 BCKDHAP12694 445 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 H2AFXP16104 143 aaPredicted RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 GPX3P22352 226 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 TACR1P25103 407 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 PTGER1P34995 402 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 RPL14P50914 215 aaKnown RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 NR0B1P51843 470 aaKnown RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 TDGF1P3P51864 188 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 WDR4P57081 412 aaKnown RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 DCAF7P61962 342 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 RPP38P78345 283 aaKnown RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 MRPS35P82673 323 aaKnown RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 RBPJQ06330 500 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 MGAT2Q10469 447 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 BST1Q10588 318 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 MAD2L1Q13257 205 aaPredicted RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 EXOSC7Q15024 291 aaKnown RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 RFTN2Q52LD8 501 aaPredicted RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 ATG16L1Q676U5 607 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 GFRALQ6UXV0 394 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 MDGA2Q7Z553 956 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 R3HCC1LQ7Z5L2 792 aaKnown RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 SULF2Q8IWU5 870 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 FAM26EQ8N5C1 309 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 CPSF7Q8N684 471 aaKnown RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 ZNF441Q8N8Z8 693 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 FAM13CQ8NE31 585 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 OR52R1Q8NGF1 315 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 ZFP28Q8NHY6 868 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 RAB3IL1Q8TBN0 382 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 GFM2Q969S9 779 aaKnown RBP14.32□□□□□ -0.12
VPS8-213ENST00000453056 REEP4Q9H6H4 257 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 VIPAS39Q9H9C1 493 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 SACM1LQ9NTJ5 587 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 SEC14L3Q9UDX4 400 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 ZNF639Q9UID6 485 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 DOPEY1Q5JWR5 2465 aa14.32□□□□□ -0.12
VPS8-213ENST00000453056 ATP6AP2A0A1C7CYW4 349 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 MYO1GB0I1T2 1018 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 ACOT7O00154 380 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 TP53I11O14683 189 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 ACOX3O15254 700 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 AKAP10O43572 662 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 PLOD3O60568 738 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 ATP6AP2O75787 350 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 LRATO95237 230 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 JUNP05412 331 aaKnown RBP14.31□□□□□ -0.12
VPS8-213ENST00000453056 PRPS2P11908 318 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 S1PR1P21453 382 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 GPR85P60893 370 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 PSPHP78330 225 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 SRSF11Q05519 484 aaKnown RBP14.31□□□□□ -0.12
VPS8-213ENST00000453056 KRTCAP3Q53RY4 240 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 CES4AQ5XG92 561 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 CLHC1Q8NHS4 586 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 PRR7Q8TB68 274 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 KAT2AQ92830 837 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 ADIPOR1Q96A54 375 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 MTERF3Q96E29 417 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 ZBED6CLQ96FA7 236 aaPredicted RBP14.31□□□□□ -0.12
VPS8-213ENST00000453056 EGLN2Q96KS0 407 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 ATP6V1G3Q96LB4 118 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 SORT1Q99523 831 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 ITPAQ9BY32 194 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 THAP1Q9NVV9 213 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 SH3BP4Q9P0V3 963 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 HAO1Q9UJM8 370 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 EIF3LQ9Y262 564 aaKnown RBP14.31□□□□□ -0.12
VPS8-213ENST00000453056 ICE1Q9Y2F5 2266 aa14.31□□□□□ -0.12
VPS8-213ENST00000453056 SETXQ7Z333 2677 aaKnown RBP14.3□□□□□ -0.12
VPS8-213ENST00000453056 A0A087WV62 115 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 NPIPA5E9PKD4 350 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 ZNF354AO60765 605 aaPredicted RBP14.3□□□□□ -0.12
VPS8-213ENST00000453056 TBX19O60806 448 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 AGFG2O95081 481 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 UNC5CO95185 931 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 MST1P26927 711 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 PLGLB1Q02325 96 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 ZNF155Q12901 538 aaPredicted RBP14.3□□□□□ -0.12
VPS8-213ENST00000453056 RPS6KA2Q15349 733 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 NTRK2Q16620 822 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.3□□□□□ -0.12
VPS8-213ENST00000453056 EIF2S3LQ2VIR3 472 aaKnown RBP14.3□□□□□ -0.12
VPS8-213ENST00000453056 ZNF791Q3KP31 576 aaPredicted RBP14.3□□□□□ -0.12
VPS8-213ENST00000453056 TRMT12Q53H54 448 aaKnown RBP14.3□□□□□ -0.12
VPS8-213ENST00000453056 C6orf136Q5SQH8 315 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 SLC22A10Q63ZE4 541 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 FAM47EQ6ZV65 393 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 FBXW8Q8N3Y1 598 aa14.3□□□□□ -0.12
VPS8-213ENST00000453056 LIX1Q8N485 282 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms