RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ARMCX4Q5H9R4 360 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 FAM69BQ5VUD6 431 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 SPATA31A6Q5VVP1 1343 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 RNLSQ5VYX0 342 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 LIPJQ5W064 366 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR4F3Q6IEY1 312 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC8B1Q6J4K2 584 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 FUT10Q6P4F1 479 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 RFWD3Q6PCD5 774 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZNF841Q6ZN19 808 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 EMSYQ7Z589 1322 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 GPR135Q8IZ08 494 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZNF444Q8N0Y2 327 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 NAGSQ8N159 534 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 PAQR4Q8N4S7 273 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 TTC21AQ8NDW8 1320 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 CHDHQ8NE62 594 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 FBXO36Q8NEA4 188 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR52N2Q8NGI0 321 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR52N4Q8NGI2 321 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR51G2Q8NGK0 314 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 PHOSPHO2Q8TCD6 241 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 SAP25Q8TEE9 199 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 PPP4R1Q8TF05 950 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 FKBP10Q96AY3 582 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 IGSF21Q96ID5 467 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC22A12Q96S37 553 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 RIT2Q99578 217 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 C7orf50Q9BRJ6 194 aaKnown RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 CCM2Q9BSQ5 444 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 PARD6BQ9BYG5 372 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 KAT8Q9H7Z6 458 aaKnown RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 SEBOXQ9HB31 216 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 ADAP2Q9NPF8 381 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 MRPL40Q9NQ50 206 aaKnown RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 POT1Q9NUX5 634 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 GAR1Q9NY12 217 aaKnown RBP4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 NLGN3Q9NZ94 848 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 ADA2Q9NZK5 511 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 ASIC3Q9UHC3 531 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 IKZF2Q9UKS7 526 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 POFUT2Q9Y2G5 429 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 PCDHAC2Q9Y5I4 1007 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 KPTNQ9Y664 436 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 WNT6Q9Y6F9 365 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 STON1Q9Y6Q2 735 aa4.08□□□□□ -1.76
HMGB3P21-201ENST00000452483 KAT6AQ92794 2004 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 ATXN2Q99700 1313 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 TRAV18A0A075B6X5 111 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 A0A0A6YYH2 397 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 A0A1B0GW15 77 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 A0A1W2PQ72 361 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 MGAT4DA6NG13 374 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 MANSC4A6NHS7 340 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 A6NJ64 397 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 OR5K4A6NMS3 321 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CENPBD1B2RD01 187 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 H3BQV1 296 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 SGK494L7N484 410 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CLIC1O00299 241 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 DLGAP1O14490 977 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 HSPA12AO43301 675 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 SLC28A2O43868 658 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 SH3BGRLO75368 114 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 RPP14O95059 124 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 NDUFA7O95182 113 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 STSP08842 583 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 OCMP0CE72 109 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 GSTT2P0CG29 244 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 GSTT2BP0CG30 244 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 PNMA6AP0CW24 399 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 HSMCR30P0CW71 290 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CBSLP0DN79 551 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 HAPLN1P10915 354 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CYP11B1P15538 503 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 ZNF23P17027 643 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 EIF2S2P20042 333 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 FCARP24071 287 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 MMP11P24347 488 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CHATP28329 748 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CDH5P33151 784 aaPredicted RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CBSP35520 551 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 TMPOP42166 694 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 TUFMP49411 452 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CASP4P49662 377 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CYP4F2P78329 520 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 TROAPQ12815 778 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 CRMP1Q14194 572 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 GCKRQ14397 625 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 GRB14Q14449 540 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 ITIH4Q14624 930 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 MESDQ14696 234 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 GRM7Q14831 915 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 FASTKD3Q14CZ7 662 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 EXOSC7Q15024 291 aaKnown RBP4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 PTPN20Q4JDL3 420 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 LINC01620Q4KN68 170 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 SYT14P1Q58G82 188 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 MIIPQ5JXC2 388 aa4.07□□□□□ -1.76
HMGB3P21-201ENST00000452483 FAM102AQ5T9C2 384 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms