RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 CSHL1Q14406 222 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 SQLEQ14534 574 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 RPS6KA2Q15349 733 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 ADPRMQ3LIE5 342 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 PDLIM3Q53GG5 364 aaPredicted RBP6.61□□□□□ -1.35
RBM39-218ENST00000449489 EIPR1Q53HC9 387 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 TIGD3Q6B0B8 471 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 TMEM81Q6P7N7 255 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 CENPUQ71F23 418 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 JAZF1Q86VZ6 243 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 C9orf40Q8IXQ3 194 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 GCNT2Q8N0V5 402 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 RFLNBQ8N5W9 214 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 OR10H5Q8NGA6 315 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 CD200R1Q8TD46 325 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 SLC5A11Q8WWX8 675 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 ATL1Q8WXF7 558 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 DIO2Q92813 273 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 RILPQ96NA2 401 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 GNRHR2Q96P88 292 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 FAM111AQ96PZ2 611 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 OR4K3Q96R72 315 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 AIF1LQ9BQI0 150 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 RHNO1Q9BSD3 238 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 OR10A4Q9H209 315 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 GOLPH3Q9H4A6 298 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 NHEJ1Q9H9Q4 299 aaPredicted RBP6.61□□□□□ -1.35
RBM39-218ENST00000449489 EIF2B3Q9NR50 452 aaKnown RBP6.61□□□□□ -1.35
RBM39-218ENST00000449489 GPATCH2Q9NW75 528 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 BFARQ9NZS9 450 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 AMFRQ9UKV5 643 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 MAPRE3Q9UPY8 281 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 WIF1Q9Y5W5 379 aa6.61□□□□□ -1.35
RBM39-218ENST00000449489 CTAGE15A4D2H0 777 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 LRIT2A6NDA9 550 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 OR6C76A6NM76 312 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 H0Y3Z8 333 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 EMC8O43402 210 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 DYRK3O43781 588 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 GPRIN2O60269 458 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 CBX7O95931 251 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 CGAP01215 116 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 IGHV4-39P01824 125 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 THBDP07204 575 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 APRTP07741 180 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 HIST1H2AGP0C0S8 130 aaPredicted RBP6.6□□□□□ -1.35
RBM39-218ENST00000449489 RHOXF2BP0C7M4 288 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 FSTP19883 344 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 HIST1H2ADP20671 130 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 TBXA2RP21731 343 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 PTPN6P29350 595 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 CASP3P42574 277 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 MSH2P43246 934 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 KIR2DL2P43627 348 aaPredicted RBP6.6□□□□□ -1.35
RBM39-218ENST00000449489 STT3AP46977 705 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 COMPP49747 757 aaPredicted RBP6.6□□□□□ -1.35
RBM39-218ENST00000449489 CASP9P55211 416 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 LIM2P55344 173 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 GFRA1P56159 465 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 RPP38P78345 283 aaKnown RBP6.6□□□□□ -1.35
RBM39-218ENST00000449489 IGLV3-21P80748 117 aaPredicted RBP6.6□□□□□ -1.35
RBM39-218ENST00000449489 BCL2A1Q16548 175 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 TOR1AIP1Q5JTV8 583 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 CYB5R2Q6BCY4 276 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 NEPROQ6NW34 567 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 C12orf54Q6X4T0 127 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 SPATC1Q76KD6 591 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 PIWIL4Q7Z3Z4 852 aaKnown RBP6.6□□□□□ -1.35
RBM39-218ENST00000449489 CTAGE6Q86UF2 777 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 PALM2Q8IXS6 379 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 KLHDC8AQ8IYD2 350 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 TAGAPQ8N103 731 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 OTUD6BQ8N6M0 293 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 FAM47BQ8NA70 645 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 FAM83FQ8NEG4 500 aaPredicted RBP6.6□□□□□ -1.35
RBM39-218ENST00000449489 SPPL2AQ8TCT8 520 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 AKAP1Q92667 903 aaKnown RBP eCLIP6.6□□□□□ -1.35
RBM39-218ENST00000449489 NEIL2Q969S2 332 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 PPP1R14AQ96A00 147 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 MS4A6EQ96DS6 147 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 MFSD3Q96ES6 412 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 C11orf24Q96F05 449 aaPredicted RBP6.6□□□□□ -1.35
RBM39-218ENST00000449489 PGM2Q96G03 612 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 FBXL20Q96IG2 436 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 HIST1H2AHQ96KK5 128 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 CCDC140Q96MF4 163 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 RUNDC3BQ96NL0 473 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 SERINC2Q96SA4 455 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 KRT12Q99456 494 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 CHP1Q99653 195 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 HIST1H2AJQ99878 128 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 H2AFJQ9BTM1 129 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 PITHD1Q9GZP4 211 aaPredicted RBP6.6□□□□□ -1.35
RBM39-218ENST00000449489 CCDC68Q9H2F9 335 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 SPNS1Q9H2V7 528 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 LYRM4Q9HD34 91 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 MAD1L1Q9Y6D9 718 aa6.6□□□□□ -1.35
RBM39-218ENST00000449489 TRAV20A0A0B4J274 112 aa6.59□□□□□ -1.35
RBM39-218ENST00000449489 ERI3O43414 337 aaKnown RBP6.59□□□□□ -1.35
RBM39-218ENST00000449489 DLX3O60479 287 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms