RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CRATP43155 626 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 RTP5Q14D33 572 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 TGIF1Q15583 401 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 COX20Q5RI15 118 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 TNFAIP8L2Q6P589 184 aaPredicted RBP13.65□□□□□ -0.22
TNF-208ENST00000449264 BHLHB9Q6PI77 547 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 C10orf111Q8N326 155 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 OR2L13Q8N349 312 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 FAM156AQ8NDB6 213 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 OR52R1Q8NGF1 315 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 NKD1Q969G9 470 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 CTHRC1Q96CG8 243 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 CCDC124Q96CT7 223 aaKnown RBP13.65□□□□□ -0.22
TNF-208ENST00000449264 OTUB1Q96FW1 271 aaPredicted RBP13.65□□□□□ -0.22
TNF-208ENST00000449264 MS4A4EQ96PG1 132 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 YIPF4Q9BSR8 244 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 CORO2BQ9UQ03 480 aa13.65□□□□□ -0.22
TNF-208ENST00000449264 A0A087WV62 115 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 PLOD3O60568 738 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 SORBS2O94875 1100 aaKnown RBP13.64□□□□□ -0.23
TNF-208ENST00000449264 CBX7O95931 251 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 HMGN2P05204 90 aaKnown RBP13.64□□□□□ -0.23
TNF-208ENST00000449264 CYC1P08574 325 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 ETFAP13804 333 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 F8A1P23610 371 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 OTX2P32243 289 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 GALNSP34059 522 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 LIPEQ05469 1076 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 MAP4K2Q12851 820 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 ZNF155Q12901 538 aaPredicted RBP13.64□□□□□ -0.23
TNF-208ENST00000449264 CEACAM7Q14002 265 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 CYP51A1Q16850 503 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 SAMD4BQ5PRF9 694 aaKnown RBP13.64□□□□□ -0.23
TNF-208ENST00000449264 FHL5Q5TD97 284 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 CPEB2Q7Z5Q1 589 aaKnown RBP13.64□□□□□ -0.23
TNF-208ENST00000449264 WDR53Q7Z5U6 358 aaPredicted RBP13.64□□□□□ -0.23
TNF-208ENST00000449264 ULK2Q8IYT8 1036 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 ARHGAP24Q8N264 748 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 C7orf57Q8NEG2 295 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 OR52N2Q8NGI0 321 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 OR14A16Q8NHC5 309 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 SLC2A12Q8TD20 617 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 DAZLQ92904 295 aaKnown RBP13.64□□□□□ -0.23
TNF-208ENST00000449264 RAD21L1Q9H4I0 556 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 ALG2Q9H553 416 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 EPS8L2Q9H6S3 715 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 KAT8Q9H7Z6 458 aaKnown RBP13.64□□□□□ -0.23
TNF-208ENST00000449264 GPATCH2Q9NW75 528 aa13.64□□□□□ -0.23
TNF-208ENST00000449264 C19orf53Q9UNZ5 99 aaPredicted RBP13.64□□□□□ -0.23
TNF-208ENST00000449264 MRPS18BQ9Y676 258 aaKnown RBP13.64□□□□□ -0.23
TNF-208ENST00000449264 PRORSD1PA6NEY8 169 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 SEC24DO94855 1032 aaPredicted RBP13.63□□□□□ -0.23
TNF-208ENST00000449264 LIPCP11150 499 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 MSX2P35548 267 aaPredicted RBP13.63□□□□□ -0.23
TNF-208ENST00000449264 GSK3BP49841 420 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 VAC14Q08AM6 782 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 DUSP8Q13202 625 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 RGNQ15493 299 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 PIGGQ5H8A4 983 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 PAPD4Q6PIY7 484 aaKnown RBP13.63□□□□□ -0.23
TNF-208ENST00000449264 TMEM205Q6UW68 189 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 GPR155Q7Z3F1 870 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 DTX1Q86Y01 620 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 HPS6Q86YV9 775 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 ZNF321PQ8N8H1 164 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 OR5D16Q8NGK9 328 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 C16orf58Q96GQ5 468 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 FBXL20Q96IG2 436 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 KCTD14Q9BQ13 255 aaPredicted RBP13.63□□□□□ -0.23
TNF-208ENST00000449264 GPR87Q9BY21 358 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 SERHL2Q9H4I8 314 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 GPN2Q9H9Y4 310 aaPredicted RBP13.63□□□□□ -0.23
TNF-208ENST00000449264 FAF1Q9UNN5 650 aaPredicted RBP13.63□□□□□ -0.23
TNF-208ENST00000449264 USP22Q9UPT9 525 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 HS3ST3B1Q9Y662 390 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 SAGE2PA6NJ88 616 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 TERTO14746 1132 aaKnown RBP13.63□□□□□ -0.23
TNF-208ENST00000449264 PRAMEF2O60811 474 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 COQ9O75208 318 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 DDAH2O95865 285 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 NUDT7P0C024 238 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 S1PR1P21453 382 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 MATN1P21941 496 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 ID4P47928 161 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 KHKP50053 298 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 MVDP53602 400 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 FUT7Q11130 342 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 MFSD12Q6NUT3 480 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 FBXW8Q8N3Y1 598 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 HORMAD2Q8N7B1 307 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 AMER2Q8N7J2 671 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 UTP4Q969X6 686 aaKnown RBP13.63□□□□□ -0.23
TNF-208ENST00000449264 KIAA1143Q96AT1 154 aaPredicted RBP13.63□□□□□ -0.23
TNF-208ENST00000449264 GIMAP5Q96F15 307 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 SENP5Q96HI0 755 aaPredicted RBP13.63□□□□□ -0.23
TNF-208ENST00000449264 ZNF578Q96N58 590 aaPredicted RBP13.63□□□□□ -0.23
TNF-208ENST00000449264 LPAR4Q99677 370 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 OR10A5Q9H207 317 aa13.63□□□□□ -0.23
TNF-208ENST00000449264 OR51I1Q9H343 314 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms