RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 C3orf18Q9UK00 162 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 RRP15Q9Y3B9 282 aaKnown RBP17.98■□□□□ 0.47
RPS28-202ENST00000449223 AHCTF1Q8WYP5 2266 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 STMND1H3BQB6 276 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 ACOT8O14734 319 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 COQ9O75208 318 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 IFNA16P05015 189 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 MAP3K8P41279 467 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 MAN2A2P49641 1150 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 EMP2P54851 167 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 RBBP4Q09028 425 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 CAMK2BQ13554 666 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 C6orf163Q5TEZ5 329 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 ERICH5Q6P6B1 374 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 PTOV1Q86YD1 416 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 NLGN4XQ8N0W4 816 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 LGI4Q8N135 537 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 NLGN4YQ8NFZ3 816 aaPredicted RBP17.98■□□□□ 0.47
RPS28-202ENST00000449223 OR7G1Q8NGA0 311 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 OR14A16Q8NHC5 309 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 CCDC124Q96CT7 223 aaKnown RBP17.98■□□□□ 0.47
RPS28-202ENST00000449223 SLC35G5Q96KT7 338 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 CRB3Q9BUF7 120 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 TMEM121BQ9BXQ6 578 aaPredicted RBP17.98■□□□□ 0.47
RPS28-202ENST00000449223 ASCL3Q9NQ33 180 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 GIN1Q9NXP7 522 aa17.98■□□□□ 0.47
RPS28-202ENST00000449223 PPIEQ9UNP9 301 aaKnown RBP17.98■□□□□ 0.47
RPS28-202ENST00000449223 A0A1W2PQ72 361 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 ELOVL7A1L3X0 281 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 C17orf105B2RV13 164 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 C21orf140B9A014 251 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 TERTO14746 1132 aaKnown RBP17.97■□□□□ 0.47
RPS28-202ENST00000449223 DYRK3O43781 588 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 IGKV3-11P04433 115 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 ETFAP13804 333 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 STAT5AP42229 794 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 CRATP43155 626 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 ANXA11P50995 505 aaKnown RBP17.97■□□□□ 0.47
RPS28-202ENST00000449223 MS4A2Q01362 244 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 VEZF1Q14119 521 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 MFSD12Q6NUT3 480 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 ANGPTL8Q6UXH0 198 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 SHISA6Q6ZSJ9 500 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 ANKRD37Q7Z713 158 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 TMEM151BQ8IW70 566 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 FAM156AQ8NDB6 213 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 DAZLQ92904 295 aaKnown RBP17.97■□□□□ 0.47
RPS28-202ENST00000449223 ACTRT3Q9BYD9 372 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 ACTR3BQ9P1U1 418 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 GMPR2Q9P2T1 348 aaKnown RBP17.97■□□□□ 0.47
RPS28-202ENST00000449223 PADI2Q9Y2J8 665 aa17.97■□□□□ 0.47
RPS28-202ENST00000449223 LOC102723996A0A087X1L8 192 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 HMGN4O00479 90 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 PRAMEF2O60811 474 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 CIB2O75838 187 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 SOX30O94993 753 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 DDAH2O95865 285 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 CLPSP04118 112 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 UMODP07911 640 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 ATXN8OSP0DMR3 200 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 TCN1P20061 433 aaPredicted RBP17.96■□□□□ 0.47
RPS28-202ENST00000449223 RBMS1P29558 406 aaKnown RBP17.96■□□□□ 0.47
RPS28-202ENST00000449223 KHKP50053 298 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 OR4D2P58180 307 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 DUSP8Q13202 625 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 LASP1Q14847 261 aaKnown RBP17.96■□□□□ 0.47
RPS28-202ENST00000449223 RTP5Q14D33 572 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 CYP51A1Q16850 503 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 VMACQ2NL98 169 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 LANCL3Q6ZV70 420 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 IFNEQ86WN2 208 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 MARCH9Q86YJ5 346 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 ZZZ3Q8IYH5 903 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 MICU2Q8IYU8 434 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 HORMAD2Q8N7B1 307 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 SIMC1Q8NDZ2 872 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 OR52E4Q8NGH9 312 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 METTL21AQ8WXB1 218 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 NACC2Q96BF6 587 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 SENP5Q96HI0 755 aaPredicted RBP17.96■□□□□ 0.47
RPS28-202ENST00000449223 ART5Q96L15 291 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 GPR87Q9BY21 358 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 ANKRA2Q9H9E1 313 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 C19orf25Q9UFG5 118 aaPredicted RBP17.96■□□□□ 0.47
RPS28-202ENST00000449223 MAGEL2Q9UJ55 1249 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 ZNF451Q9Y4E5 1061 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 CLCA3PQ9Y6N3 262 aa17.96■□□□□ 0.47
RPS28-202ENST00000449223 DCHS1Q96JQ0 3298 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 BRINP1O60477 761 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 GGT1P19440 569 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 MATN1P21941 496 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 MSX2P35548 267 aaPredicted RBP17.95■□□□□ 0.46
RPS28-202ENST00000449223 PRIM2P49643 509 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 PRKAG1P54619 331 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 FOXL2P58012 376 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 DSTNP60981 165 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 ACTR3P61158 418 aa17.95■□□□□ 0.46
RPS28-202ENST00000449223 EEF1A2Q05639 463 aaKnown RBP17.95■□□□□ 0.46
RPS28-202ENST00000449223 ZNF267Q14586 743 aaPredicted RBP17.95■□□□□ 0.46
RPS28-202ENST00000449223 LCN8Q6JVE9 175 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms