RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 STX18Q9P2W9 335 aaKnown RBP23.24■■□□□ 1.31
RFFL-206ENST00000447669 AP4S1Q9Y587 144 aa23.24■■□□□ 1.31
RFFL-206ENST00000447669 CNOT3O75175 753 aaKnown RBP23.23■■□□□ 1.31
RFFL-206ENST00000447669 TIPRLO75663 272 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 KDELR2P33947 212 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 PCGF2P35227 344 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 RORAP35398 523 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 DCDP81605 110 aaKnown RBP23.23■■□□□ 1.31
RFFL-206ENST00000447669 CDK6Q00534 326 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 E2F1Q01094 437 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 MAP7Q14244 749 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 CDCP2Q5VXM1 449 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 ERICH5Q6P6B1 374 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 HMGN2P46Q86SG4 172 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 TMEM38AQ9H6F2 299 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 FBXO8Q9NRD0 319 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 DCAF13Q9NV06 445 aaKnown RBP23.23■■□□□ 1.31
RFFL-206ENST00000447669 MEN1O00255 615 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 PRKD3O94806 890 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 CBX7O95931 251 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 RECKO95980 971 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 MT-CO3P00414 261 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 ARAFP10398 606 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 BMP2P12643 396 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 S1PR1P21453 382 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 ZNF267Q14586 743 aaPredicted RBP23.23■■□□□ 1.31
RFFL-206ENST00000447669 HES3Q5TGS1 186 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 MLIPQ5VWP3 458 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 RAB11FIP2Q7L804 512 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 PACS2Q86VP3 889 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 GALNT12Q8IXK2 581 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 VWA5B2Q8N398 1253 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 NRG4Q8WWG1 115 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 OR7D2Q96RA2 312 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 ULBP3Q9BZM4 244 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 MKKSQ9NPJ1 570 aaPredicted RBP23.23■■□□□ 1.31
RFFL-206ENST00000447669 C19orf53Q9UNZ5 99 aaPredicted RBP23.23■■□□□ 1.31
RFFL-206ENST00000447669 GVINP1Q7Z2Y8 2422 aa23.23■■□□□ 1.31
RFFL-206ENST00000447669 FREM2Q5SZK8 3169 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 ZNF682O95780 498 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 TFPTP0C1Z6 253 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 STT3AP46977 705 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 MAN2A2P49641 1150 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 FUT5Q11128 374 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 ILKQ13418 452 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.22■■□□□ 1.31
RFFL-206ENST00000447669 LANCL3Q6ZV70 420 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 OR52R1Q8NGF1 315 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 SLC9A6Q92581 669 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 TMEM19Q96HH6 336 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 PKP2Q99959 881 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 CNPPD1Q9BV87 410 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 NTMQ9P121 344 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 PTGFRNQ9P2B2 879 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 PISDQ9UG56 409 aa23.22■■□□□ 1.31
RFFL-206ENST00000447669 FAM186AA6NE01 2351 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 ZGLP1P0C6A0 271 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 SLC7A1P30825 629 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 NSDHLQ15738 373 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 MFSD12Q6NUT3 480 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 BHLHB9Q6PI77 547 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 ZNF321PQ8N8H1 164 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 ANKFN1Q8N957 763 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 ZNF675Q8TD23 568 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 LRTOMTQ8WZ04 291 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 MOAP1Q96BY2 351 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 SLC35A4Q96G79 324 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 MS4A4EQ96PG1 132 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 SPATA9Q9BWV2 254 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 IRF2BPLQ9H1B7 796 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 CCM2LQ9NUG4 571 aaPredicted RBP23.21■■□□□ 1.31
RFFL-206ENST00000447669 IGKV3D-11A0A0A0MRZ8 115 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 BLACEA4D250 179 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 PLOD3O60568 738 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 CPNE3O75131 537 aaKnown RBP23.21■■□□□ 1.31
RFFL-206ENST00000447669 TNNI3P19429 210 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 SLC34A1Q06495 639 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 VEZF1Q14119 521 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 CYP27C1Q4G0S4 372 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 TBCELQ5QJ74 424 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 VTCN1Q7Z7D3 282 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 RNF145Q96MT1 663 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 SEMA6AQ9H2E6 1030 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 RUBCNLQ9H714 662 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 IFT80Q9P2H3 777 aaPredicted RBP23.21■■□□□ 1.31
RFFL-206ENST00000447669 ANAPC2Q9UJX6 822 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 ERVK-19Q9WJR5 959 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 DTX4Q9Y2E6 619 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 NINQ8N4C6 2090 aa23.21■■□□□ 1.31
RFFL-206ENST00000447669 PTPRZ1P23471 2315 aaPredicted RBP23.2■■□□□ 1.3
RFFL-206ENST00000447669 PRKNO60260 465 aaPredicted RBP23.2■■□□□ 1.3
RFFL-206ENST00000447669 PSMA4P25789 261 aaKnown RBP23.2■■□□□ 1.3
RFFL-206ENST00000447669 MAP4K2Q12851 820 aa23.2■■□□□ 1.3
RFFL-206ENST00000447669 QSOX2Q6ZRP7 698 aa23.2■■□□□ 1.3
RFFL-206ENST00000447669 PTPMT1Q8WUK0 201 aaPredicted RBP23.2■■□□□ 1.3
RFFL-206ENST00000447669 RSPO3Q9BXY4 272 aaPredicted RBP23.2■■□□□ 1.3
RFFL-206ENST00000447669 ACTRT3Q9BYD9 372 aa23.2■■□□□ 1.3
RFFL-206ENST00000447669 STRADBQ9C0K7 418 aa23.2■■□□□ 1.3
RFFL-206ENST00000447669 FAM149AA5PLN7 773 aa23.2■■□□□ 1.3
RFFL-206ENST00000447669 M0QX08 132 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms