RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 DPYSL3Q14195 570 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 ITIH4Q14624 930 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 FAM189A2Q15884 450 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 IQCCQ4KMZ1 466 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 TEX44Q53QW1 395 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 ATL3Q6DD88 541 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 KLHL10Q6JEL2 608 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 TRMT10BQ6PF06 316 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 RAB42Q8N4Z0 105 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 PQLC3Q8N755 202 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 FAM83FQ8NEG4 500 aaPredicted RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 OR10G3Q8NGC4 313 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 KCTD4Q8WVF5 259 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 ASZ1Q8WWH4 475 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 KISS1RQ969F8 398 aaPredicted RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 LRRC58Q96CX6 371 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 OXNAD1Q96HP4 312 aaPredicted RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 GNRHR2Q96P88 292 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 SORCS2Q96PQ0 1159 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 SERINC2Q96SA4 455 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 TACO1Q9BSH4 297 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 C1QTNF5Q9BXJ0 243 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 GOLPH3LQ9H4A5 285 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 PLSCR4Q9NRQ2 329 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 PARVAQ9NVD7 372 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 PTBP2Q9UKA9 531 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 ADAM29Q9UKF5 820 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 PROCRQ9UNN8 238 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 GPR52Q9Y2T5 361 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 MMACHCQ9Y4U1 282 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 GOLGA8QA0A0J9YX86 632 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 ESYT3A0FGR9 886 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 GOLGA8OA6NCC3 632 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 GOLGA8NF8WBI6 632 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 GOLGA8RI6L899 631 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 CCL22O00626 93 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 FRS3O43559 492 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 TJP3O95049 919 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 LRATO95237 230 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 PPP1R3DO95685 299 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 ZNF708P17019 499 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 CHRM3P20309 590 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 PRTN3P24158 256 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 APEX1P27695 318 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 MC4RP32245 332 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 FOXN2P32314 431 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 ARHGAP25P42331 645 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 CSE1LP55060 971 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 CDH11P55287 796 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 JAM2P57087 298 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 RPS15AP62244 130 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 ABATP80404 500 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 SRYQ05066 204 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 HERC3Q15034 1050 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 EXOC3L2Q2M3D2 409 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 ENPP6Q6UWR7 440 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 DND1Q8IYX4 353 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 MUC15Q8N387 334 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 ZNF321PQ8N8H1 164 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 DTX3Q8N9I9 347 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 CAMKVQ8NCB2 501 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 ZNF540Q8NDQ6 660 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 ZNF740Q8NDX6 193 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 NUDT10Q8NFP7 164 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 OR5L2Q8NGL0 311 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 GABPB2Q8TAK5 448 aaPredicted RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 SREK1Q8WXA9 508 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 ATL1Q8WXF7 558 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 SMPDL3AQ92484 453 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 NUDT11Q96G61 164 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 C1orf147Q96MC9 270 aaPredicted RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 RNF122Q9H9V4 155 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 ZMAT3Q9HA38 289 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 CLK4Q9HAZ1 481 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 EIF2B3Q9NR50 452 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 PNO1Q9NRX1 252 aaKnown RBP2.88□□□□□ -1.95
PMS1-215ENST00000447232 DNAJC11Q9NVH1 559 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 SMARCAL1Q9NZC9 954 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 TAC3Q9UHF0 121 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 CAPN11Q9UMQ6 739 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 PPIAL4AQ9Y536 164 aa2.88□□□□□ -1.95
PMS1-215ENST00000447232 STAB2Q8WWQ8 2551 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 CSMD3Q7Z407 3707 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 SLC22A20A6NK97 555 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 E7EQL1 145 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 SNX4O95219 450 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 CCNDBP1O95273 360 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 OR56A5P0C7T3 313 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 GIFP27352 417 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 RPA3P35244 121 aaPredicted RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 RPL21P46778 160 aaKnown RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 CHN2P52757 468 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 ASPHQ12797 758 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 KRT81Q14533 505 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 ARHGAP19Q14CB8 494 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 ELAVL1Q15717 326 aaKnown RBP2.87□□□□□ -1.95
PMS1-215ENST00000447232 TAB1Q15750 504 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 NTRK2Q16620 822 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 DEFB134Q4QY38 66 aa2.87□□□□□ -1.95
PMS1-215ENST00000447232 TTC23LQ6PF05 361 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms