RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 SLC6A15Q9H2J7 730 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 ACKR4Q9NPB9 350 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 NPDC1Q9NQX5 325 aaPredicted RBP19.04■□□□□ 0.64
SDC1-205ENST00000447124 NMRK1Q9NWW6 199 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 TIMM22Q9Y584 194 aa19.04■□□□□ 0.64
SDC1-205ENST00000447124 FAM90A27PA6NNH2 459 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 ULK1O75385 1050 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 CBX7O95931 251 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 KRT6AP02538 564 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 KRT6BP04259 564 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 ATP1B1P05026 303 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 HSD3B1P14060 373 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 HSD3B2P26439 372 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 KRT6CP48668 564 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 HMGCS1Q01581 520 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 RPS6KA2Q15349 733 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 LTB4RQ15722 352 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 SCIMPQ6UWF3 145 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 MEX3BQ6ZN04 569 aaKnown RBP19.03■□□□□ 0.64
SDC1-205ENST00000447124 ACAD11Q709F0 780 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 SARAFQ96BY9 339 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 L3HYPDHQ96EM0 354 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 KCNA7Q96RP8 456 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 ANGPTL4Q9BY76 406 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 ACPTQ9BZG2 426 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 GSTO2Q9H4Y5 243 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 EXO5Q9H790 373 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 QPCTLQ9NXS2 382 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 ALKBH4Q9NXW9 302 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 PSMC3IPQ9P2W1 217 aaPredicted RBP19.03■□□□□ 0.64
SDC1-205ENST00000447124 MCM8Q9UJA3 840 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 AKAP9Q99996 3911 aa19.03■□□□□ 0.64
SDC1-205ENST00000447124 CAPN14A8MX76 684 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 G3V2L1 256 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 UBFD1O14562 309 aaKnown RBP19.02■□□□□ 0.64
SDC1-205ENST00000447124 TP53I11O14683 189 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 SHBGP04278 402 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 ABCB1P08183 1280 aaPredicted RBP19.02■□□□□ 0.64
SDC1-205ENST00000447124 GSTA1P08263 222 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 IGFBP2P18065 325 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 ADH7P40394 386 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 CASP3P42574 277 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 TRPC1P48995 793 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 ALDH9A1P49189 494 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 CSTF3Q12996 717 aaKnown RBP19.02■□□□□ 0.64
SDC1-205ENST00000447124 TMEM198Q66K66 360 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 LIX1LQ8IVB5 337 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 SLC22A9Q8IVM8 553 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 VWA5B2Q8N398 1253 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 C17orf47Q8NEP4 570 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 KLHL29Q96CT2 875 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 FAIM2Q9BWQ8 316 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 ITPAQ9BY32 194 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 DCDC2Q9UHG0 476 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 BCAP29Q9UHQ4 241 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 PSME2Q9UL46 239 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 DLGAP4Q9Y2H0 992 aa19.02■□□□□ 0.64
SDC1-205ENST00000447124 A0A0G2JNJ9 132 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 GOLGA6L10A6NI86 522 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 FIGNL2A6NMB9 653 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 IL3P08700 152 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 ABCD3P28288 659 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 HMOX2P30519 316 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 FOXA1P55317 472 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 LCP2Q13094 533 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 NNATQ16517 81 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 TBCELQ5QJ74 424 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 WLSQ5T9L3 541 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 B3GNT6Q6ZMB0 384 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 CCDC116Q8IYX3 515 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 OR52R1Q8NGF1 315 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 OR10Q1Q8NGQ4 319 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 NEIL3Q8TAT5 605 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 C11orf24Q96F05 449 aaPredicted RBP19.01■□□□□ 0.63
SDC1-205ENST00000447124 RILPQ96NA2 401 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 GNRHR2Q96P88 292 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 SECISBP2Q96T21 854 aaKnown RBP19.01■□□□□ 0.63
SDC1-205ENST00000447124 UBQLN3Q9H347 655 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 KCNJ16Q9NPI9 418 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 Q9UFV3 132 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 UTS2RQ9UKP6 389 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 PLLPQ9Y342 182 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 HCFC1P51610 2035 aa19.01■□□□□ 0.63
SDC1-205ENST00000447124 OTOGQ6ZRI0 2925 aa19■□□□□ 0.63
SDC1-205ENST00000447124 WDR1O75083 606 aa19■□□□□ 0.63
SDC1-205ENST00000447124 ESRRBO95718 433 aa19■□□□□ 0.63
SDC1-205ENST00000447124 PCSK2P16519 638 aa19■□□□□ 0.63
SDC1-205ENST00000447124 SSTR2P30874 369 aa19■□□□□ 0.63
SDC1-205ENST00000447124 EMDP50402 254 aa19■□□□□ 0.63
SDC1-205ENST00000447124 PKNOX1P55347 436 aa19■□□□□ 0.63
SDC1-205ENST00000447124 NRG3P56975 720 aa19■□□□□ 0.63
SDC1-205ENST00000447124 MRPS35P82673 323 aaKnown RBP19■□□□□ 0.63
SDC1-205ENST00000447124 BTKQ06187 659 aa19■□□□□ 0.63
SDC1-205ENST00000447124 PRSS53Q2L4Q9 553 aa19■□□□□ 0.63
SDC1-205ENST00000447124 C1orf185Q5T7R7 199 aa19■□□□□ 0.63
SDC1-205ENST00000447124 C6orf163Q5TEZ5 329 aa19■□□□□ 0.63
SDC1-205ENST00000447124 SEM1Q6ZVN7 128 aa19■□□□□ 0.63
SDC1-205ENST00000447124 GBP7Q8N8V2 638 aaPredicted RBP19■□□□□ 0.63
SDC1-205ENST00000447124 C16orf78Q8WTQ4 265 aa19■□□□□ 0.63
SDC1-205ENST00000447124 HGDQ93099 445 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms