RNA–Protein interactions for RNA: ENST00000446623.2

HMGN1P36-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 36, humanhuman

BASIC

Gene HMGN1P36, Length 298 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P36-201ENST00000446623 YTHDF3Q7Z739 585 aaKnown RBP5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 TMEM139Q8IV31 216 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 C9orf40Q8IXQ3 194 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 LRRC75A-AS1Q8N1F1 130 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 GPATCH11Q8N954 259 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 SIMC1Q8NDZ2 872 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 MCUQ8NE86 351 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 OR2L5Q8NG80 312 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 OR10G3Q8NGC4 313 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 NUBPLQ8TB37 319 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 SLC22A8Q8TCC7 542 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 PAQR8Q8TEZ7 354 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 ZNF721Q8TF20 911 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 SMPDL3BQ92485 455 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 CCT6BQ92526 530 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 PPP1R14AQ96A00 147 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 SPACA9Q96E40 222 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 SIGLEC10Q96LC7 697 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 Q96MF0 132 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 JSRP1Q96MG2 331 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 RUNDC3BQ96NL0 473 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 SERPINB12Q96P63 405 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 SERINC2Q96SA4 455 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 BAG1Q99933 345 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 WDR83Q9BRX9 315 aaKnown RBP5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 BDH2Q9BUT1 245 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 HOMER3Q9NSC5 361 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 COPS7AQ9UBW8 275 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 DAPP1Q9UN19 280 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 CHCHD2Q9Y6H1 151 aaPredicted RBP5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 KCNE2Q9Y6J6 123 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 SVEP1Q4LDE5 3571 aa5.31□□□□□ -1.56
HMGN1P36-201ENST00000446623 DSCAMO60469 2012 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 TENM1Q9UKZ4 2725 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 USF3Q68DE3 2245 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 SH3D21A4FU49 640 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 MBD3L4A6NDZ8 208 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 MBD3L3A6NE82 208 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 MBD3L5A6NJ08 208 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 CD8B2A6NJW9 211 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 HRKO00198 91 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 CDC7O00311 574 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 H2AFYO75367 372 aaKnown RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 TRIM3O75382 744 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 TRAPPC6AO75865 159 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 C1QAP02745 245 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 AHSGP02765 367 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 IGKV3-11P04433 115 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 CCDC175P0C221 793 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 C1GALT1C1LP0DN25 315 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 COX7A2P14406 83 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 GSTM2P28161 218 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 OPRM1P35372 400 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 GDF5P43026 501 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 STT3AP46977 705 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 SLC6A12P48065 614 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 ZNF75DP51815 510 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 MTTPP55157 894 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 TBL3Q12788 808 aaKnown RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 FOXF2Q12947 444 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 SERTAD2Q14140 314 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 CRYMQ14894 314 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 SF3B4Q15427 424 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 DCST1Q5T197 706 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 VASNQ6EMK4 673 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 TTC27Q6P3X3 843 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 TRIM40Q6P9F5 258 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 PRSS57Q6UWY2 283 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 TMIGD1Q6UXZ0 262 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 DGAT2L6Q6ZPD8 337 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 PM20D2Q8IYS1 436 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 RASGEF1CQ8N431 466 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 SLC15A4Q8N697 577 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 C9orf106Q8NAJ2 232 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 TTLQ8NG68 377 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 MBD3L2Q8NHZ7 208 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 GABPB2Q8TAK5 448 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 PIGTQ969N2 578 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 SENP5Q96HI0 755 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 F2RL3Q96RI0 385 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 TRIB1Q96RU8 372 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 PIP5K1AQ99755 562 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 DOHHQ9BU89 302 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 RBM24Q9BX46 236 aaKnown RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 REXO4Q9GZR2 422 aaKnown RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 NT5DC2Q9H857 520 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 COPS7BQ9H9Q2 264 aaPredicted RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 LYRM4Q9HD34 91 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 GALNT8Q9NY28 637 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 CNIH4Q9P003 139 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 SLC17A6Q9P2U8 582 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 TRPS1Q9UHF7 1281 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 CNOT11Q9UKZ1 510 aaKnown RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 GUCA1BQ9UMX6 200 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 CAMK2AQ9UQM7 478 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 EIF3LQ9Y262 564 aaKnown RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 ABCA1O95477 2261 aa5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 CHD3Q12873 2000 aaKnown RBP5.3□□□□□ -1.56
HMGN1P36-201ENST00000446623 MED12LQ86YW9 2145 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms