RNA–Protein interactions for RNA: ENST00000445667.6

USE1-202, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene USE1, Length 795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-202ENST00000445667 OR52R1Q8NGF1 315 aa13.58□□□□□ -0.24
USE1-202ENST00000445667 KAT2AQ92830 837 aa13.58□□□□□ -0.24
USE1-202ENST00000445667 CTHRC1Q96CG8 243 aa13.58□□□□□ -0.24
USE1-202ENST00000445667 NXF5Q9H1B4 397 aaKnown RBP13.58□□□□□ -0.24
USE1-202ENST00000445667 ZDHHC11Q9H8X9 412 aa13.58□□□□□ -0.24
USE1-202ENST00000445667 IL1RL2Q9HB29 575 aa13.58□□□□□ -0.24
USE1-202ENST00000445667 SLC35C2Q9NQQ7 365 aa13.58□□□□□ -0.24
USE1-202ENST00000445667 PLSCR2Q9NRY7 297 aa13.58□□□□□ -0.24
USE1-202ENST00000445667 CNOT11Q9UKZ1 510 aaKnown RBP13.58□□□□□ -0.24
USE1-202ENST00000445667 RAB21Q9UL25 225 aa13.58□□□□□ -0.24
USE1-202ENST00000445667 HRH3Q9Y5N1 445 aa13.58□□□□□ -0.24
USE1-202ENST00000445667 MYO7BQ6PIF6 2116 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 ATP6AP2A0A1C7CYW4 349 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 TMEM233B4DJY2 109 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 SLC28A1O00337 649 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 ATP6AP2O75787 350 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 RSL1D1O76021 490 aaKnown RBP13.57□□□□□ -0.24
USE1-202ENST00000445667 TPOP07202 933 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 CELA3AP09093 270 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 LINC00032P0C843 101 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 DDCP20711 480 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 NRG3P56975 720 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 ADORA2A-AS1P86434 159 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 ZNF844Q08AG5 666 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 KIAA0040Q15053 153 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 KRT71Q3SY84 523 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 ZNF628Q5EBL2 1059 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 ARL13AQ5H913 290 aaPredicted RBP13.57□□□□□ -0.24
USE1-202ENST00000445667 BICRALQ6AI39 1079 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 ZNF787Q6DD87 383 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 FAM71E1Q6IPT2 247 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 NOXRED1Q6NXP6 359 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 RGS9BPQ6ZS82 235 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 Q6ZSR9 355 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 CD163Q86VB7 1156 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 TICAM1Q8IUC6 712 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 DND1Q8IYX4 353 aaKnown RBP13.57□□□□□ -0.24
USE1-202ENST00000445667 FBXW8Q8N3Y1 598 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 OR9A2Q8NGT5 310 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.57□□□□□ -0.24
USE1-202ENST00000445667 FAM57AQ8TBR7 257 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 DIO2Q92813 273 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 EGLN2Q96KS0 407 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 JSRP1Q96MG2 331 aaPredicted RBP13.57□□□□□ -0.24
USE1-202ENST00000445667 TRMOQ9BU70 441 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 ITPAQ9BY32 194 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 TUBB1Q9H4B7 451 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 GIMAP4Q9NUV9 329 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 CNIH4Q9P003 139 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 ENTPD4Q9Y227 616 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 CFL2Q9Y281 166 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 MEMO1Q9Y316 297 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 LIPGQ9Y5X9 500 aa13.57□□□□□ -0.24
USE1-202ENST00000445667 CAPN14A8MX76 684 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 ADAM10O14672 748 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 TP53I11O14683 189 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 TYROBPO43914 113 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 NPHS1O60500 1241 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 RFPL3SP0C7P2 107 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 TACR1P25103 407 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 ABCD3P28288 659 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 GSTM5P46439 218 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 EMDP50402 254 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 SLC10A1Q14973 349 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 RPS6KA2Q15349 733 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 KANK2Q63ZY3 851 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 DESI1Q6ICB0 168 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 MTFR2Q6P444 385 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 ARHGAP11AQ6P4F7 1023 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 PAOXQ6QHF9 649 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 SAMD14Q8IZD0 417 aaPredicted RBP13.56□□□□□ -0.24
USE1-202ENST00000445667 C17orf47Q8NEP4 570 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 OR2T11Q8NH01 316 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 ZNF675Q8TD23 568 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 LCORQ96JN0 433 aaPredicted RBP13.56□□□□□ -0.24
USE1-202ENST00000445667 BBS4Q96RK4 519 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 DOHHQ9BU89 302 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 LRTM1Q9HBL6 345 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 MYNNQ9NPC7 610 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 C1orf109Q9NX04 203 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 EHD3Q9NZN3 535 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 EXO1Q9UQ84 846 aaKnown RBP13.56□□□□□ -0.24
USE1-202ENST00000445667 DNAJC15Q9Y5T4 150 aa13.56□□□□□ -0.24
USE1-202ENST00000445667 DIDO1Q9BTC0 2240 aaKnown RBP13.56□□□□□ -0.24
USE1-202ENST00000445667 SPTAN1Q13813 2472 aaKnown RBP13.55□□□□□ -0.24
USE1-202ENST00000445667 DOPEY1Q5JWR5 2465 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 MYO1GB0I1T2 1018 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 NPIPA2E9PIF3 369 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 NPIPA3F8WFD2 350 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 RGS16O15492 202 aaPredicted RBP13.55□□□□□ -0.24
USE1-202ENST00000445667 RGS14O43566 566 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 CHEK2O96017 543 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 IGHG3P01860 377 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 JUNP05412 331 aaKnown RBP13.55□□□□□ -0.24
USE1-202ENST00000445667 BPGMP07738 259 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 FGF4P08620 206 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 ARRB2P32121 409 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 MPIP34949 423 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 DCTP40126 519 aa13.55□□□□□ -0.24
USE1-202ENST00000445667 CEBPEQ15744 281 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms