RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 FAM110BQ8TC76 370 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 MCOLN3Q8TDD5 553 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 TMEM171Q8WVE6 324 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 FAM3CQ92520 227 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 SYTL4Q96C24 671 aaPredicted RBP3.67□□□□□ -1.82
UBR3-206ENST00000444475 ORAI1Q96D31 301 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 VPS35Q96QK1 796 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 CMKLR1Q99788 373 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 MED10Q9BTT4 135 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 ASCC2Q9H1I8 757 aaPredicted RBP3.67□□□□□ -1.82
UBR3-206ENST00000444475 ANAPC7Q9UJX3 599 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 MMACHCQ9Y4U1 282 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 ZNF840PA6NDX5 716 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 ZNF233A6NK53 670 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 C2orf74A8MZ97 194 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 B8ZZF3 427 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 RGS9O75916 674 aaPredicted RBP3.67□□□□□ -1.82
UBR3-206ENST00000444475 ATXN1LP0C7T5 689 aaKnown RBP3.67□□□□□ -1.82
UBR3-206ENST00000444475 ZDHHC11BP0C7U3 371 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 GSTT2P0CG29 244 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 GSTT2BP0CG30 244 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 STOMP27105 288 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 SLC8A1P32418 973 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 KIR2DL2P43627 348 aaPredicted RBP3.67□□□□□ -1.82
UBR3-206ENST00000444475 RAP1GDS1P52306 607 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 LSM11P83369 360 aaKnown RBP eCLIP3.67□□□□□ -1.82
UBR3-206ENST00000444475 NAAAQ02083 359 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 SULT2A1Q06520 285 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 CCNIQ14094 377 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 ADGRE1Q14246 886 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 TBR1Q16650 682 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 HIST2H2ACQ16777 129 aaPredicted RBP3.67□□□□□ -1.82
UBR3-206ENST00000444475 TMEM249Q2WGJ8 235 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 ZNF658BQ4V348 819 aaPredicted RBP3.67□□□□□ -1.82
UBR3-206ENST00000444475 CCDC58Q4VC31 144 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 CMPK2Q5EBM0 449 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 MPZL3Q6UWV2 235 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 SIGLEC15Q6ZMC9 328 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 RNF111Q6ZNA4 994 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 TRIM69Q86WT6 500 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 RNF130Q86XS8 419 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 SPEM1Q8N4L4 309 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 CCDC124Q96CT7 223 aaKnown RBP3.67□□□□□ -1.82
UBR3-206ENST00000444475 KLHDC3Q9BQ90 382 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 C20orf24Q9BUV8 137 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 SIK2Q9H0K1 926 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 ARMC1Q9NVT9 282 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 NYAP2Q9P242 653 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 P2RX2Q9UBL9 471 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 FADS3Q9Y5Q0 445 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 DUSP10Q9Y6W6 482 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 IQGAP1P46940 1657 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 PHLPP1O60346 1717 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 EIF3AQ14152 1382 aaKnown RBP3.67□□□□□ -1.82
UBR3-206ENST00000444475 RGS12O14924 1447 aa3.67□□□□□ -1.82
UBR3-206ENST00000444475 STRCP1A6NGW2 1772 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 A0A1W2PPV9 198 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 A0A1W2PQL4 384 aaPredicted RBP3.66□□□□□ -1.82
UBR3-206ENST00000444475 PCP4L1A6NKN8 68 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 C3orf70A6NLC5 250 aaPredicted RBP3.66□□□□□ -1.82
UBR3-206ENST00000444475 ACSL3O95573 720 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 HPXP02790 462 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 GLI4P10075 376 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 NCK1P16333 377 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 HLA-DMAP28067 261 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 EIF2S3P41091 472 aaKnown RBP3.66□□□□□ -1.82
UBR3-206ENST00000444475 AQP2P41181 271 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 ETV4P43268 484 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 HNRNPMP52272 730 aaKnown RBP eCLIP3.66□□□□□ -1.82
UBR3-206ENST00000444475 NXPH1P58417 271 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 PRKCQQ04759 706 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 ALKBH1Q13686 389 aaKnown RBP3.66□□□□□ -1.82
UBR3-206ENST00000444475 DCAF4L1Q3SXM0 396 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 CAPN13Q6MZZ7 669 aaPredicted RBP3.66□□□□□ -1.82
UBR3-206ENST00000444475 PARGQ86W56 976 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 TMPRSS12Q86WS5 348 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 TMEM173Q86WV6 379 aaPredicted RBP3.66□□□□□ -1.82
UBR3-206ENST00000444475 MEX3DQ86XN8 651 aaKnown RBP3.66□□□□□ -1.82
UBR3-206ENST00000444475 LRRC17Q8N6Y2 441 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 SLC44A5Q8NCS7 719 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 CCDC112Q8NEF3 446 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 B3GNT7Q8NFL0 401 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 HM13Q8TCT9 377 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 TMEM170AQ8WVE7 144 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 P3H4Q92791 437 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 SMARCD2Q92925 531 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 SRRQ9GZT4 340 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 ASB7Q9H672 318 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 NECAP2Q9NVZ3 263 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 TAS2R9Q9NYW1 312 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 KPTNQ9Y664 436 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 NRCAMQ92823 1304 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 ZFYVE9O95405 1425 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 VSTM2BA6NLU5 285 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 NPIPB6E9PJ23 425 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 TRAFD1O14545 582 aaPredicted RBP3.66□□□□□ -1.82
UBR3-206ENST00000444475 SIVA1O15304 175 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 NDUFA7O95182 113 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 C9P02748 559 aa3.66□□□□□ -1.82
UBR3-206ENST00000444475 GAPDHP04406 335 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms