RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 ACAD11Q709F0 780 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 ZNF843Q8N446 348 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 Q8NA96 180 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 NUBPLQ8TB37 319 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 ADIPOR1Q96A54 375 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 ELP4Q96EB1 424 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 SIGLEC12Q96PQ1 595 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 GAL3ST4Q96RP7 486 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 RASL10BQ96S79 203 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 CCDC28BQ9BUN5 200 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 RNF32Q9H0A6 362 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 CLMPQ9H6B4 373 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 SIRT3Q9NTG7 399 aaPredicted RBP14.84□□□□□ -0.03
USP39-205ENST00000442708 ACSS1Q9NUB1 689 aaPredicted RBP14.84□□□□□ -0.03
USP39-205ENST00000442708 ERVK-11Q9UQG0 969 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 PRRC2CQ9Y520 2896 aaKnown RBP14.84□□□□□ -0.03
USP39-205ENST00000442708 EML6Q6ZMW3 1958 aa14.84□□□□□ -0.03
USP39-205ENST00000442708 DYTNA2CJ06 578 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 OR5H15A6NDH6 313 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 UPK1AO00322 258 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 PLOD2O00469 737 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 SCN2BO60939 215 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 OR6B1O95007 311 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 TRHRP34981 398 aaPredicted RBP14.83□□□□□ -0.04
USP39-205ENST00000442708 TNFSF10P50591 281 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 DGKQP52824 942 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 MANFP55145 182 aaKnown RBP14.83□□□□□ -0.04
USP39-205ENST00000442708 ARG2P78540 354 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 PDCD4Q53EL6 469 aaKnown RBP14.83□□□□□ -0.04
USP39-205ENST00000442708 PIGGQ5H8A4 983 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 SPANXN4Q5MJ08 99 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 OR4F3Q6IEY1 312 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 LYPD8Q6UX82 237 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 Q6ZS92 163 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 SLC29A4Q7RTT9 530 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 HPS6Q86YV9 775 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 OR2L13Q8N349 312 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 MDS2Q8NDY4 140 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 OR5L2Q8NGL0 311 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 TM9SF4Q92544 642 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 TESCQ96BS2 214 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 ZBED6CLQ96FA7 236 aaPredicted RBP14.83□□□□□ -0.04
USP39-205ENST00000442708 MAGED4Q96JG8 741 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 DUSP26Q9BV47 211 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 ITPAQ9BY32 194 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 TRIM4Q9C037 500 aa14.83□□□□□ -0.04
USP39-205ENST00000442708 SDR39U1Q9NRG7 319 aaPredicted RBP14.83□□□□□ -0.04
USP39-205ENST00000442708 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.83□□□□□ -0.04
USP39-205ENST00000442708 YARS2Q9Y2Z4 477 aaKnown RBP14.83□□□□□ -0.04
USP39-205ENST00000442708 SMG1Q96Q15 3661 aaKnown RBP14.82□□□□□ -0.04
USP39-205ENST00000442708 A0A087WV62 115 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 C2orf92A0A1B0GVN3 265 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 A0A1W2PRB8 838 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 FCHO1O14526 889 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 POLR3GO15318 223 aaPredicted RBP14.82□□□□□ -0.04
USP39-205ENST00000442708 NEURL1O76050 574 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 PSMG1O95456 288 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 C6orf47O95873 294 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 IDO1P14902 403 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 CD1EP15812 388 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 SOX3P41225 446 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 SSR4P51571 173 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 KLRB1Q12918 225 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 MLC1Q15049 377 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 NNATQ16517 81 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 GSTA3Q16772 222 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 SPINK14Q6IE38 97 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 TMEM64Q6YI46 380 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 CLECL1Q8IZS7 167 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 TEX19Q8NA77 164 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 OR8J2Q8NGG1 315 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 OR9I1Q8NGQ6 314 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 STON2Q8WXE9 905 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 ERP27Q96DN0 273 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 PRPF18Q99633 342 aaKnown RBP14.82□□□□□ -0.04
USP39-205ENST00000442708 UTP23Q9BRU9 249 aaKnown RBP14.82□□□□□ -0.04
USP39-205ENST00000442708 HES7Q9BYE0 225 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 BHLHE41Q9C0J9 482 aaPredicted RBP14.82□□□□□ -0.04
USP39-205ENST00000442708 NXF5Q9H1B4 397 aaKnown RBP14.82□□□□□ -0.04
USP39-205ENST00000442708 TRIM45Q9H8W5 580 aaPredicted RBP14.82□□□□□ -0.04
USP39-205ENST00000442708 ATAD3AQ9NVI7 634 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 FAM53CQ9NYF3 392 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 C19orf53Q9UNZ5 99 aaPredicted RBP14.82□□□□□ -0.04
USP39-205ENST00000442708 B3GNT3Q9Y2A9 372 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 HEMK1Q9Y5R4 338 aaPredicted RBP14.82□□□□□ -0.04
USP39-205ENST00000442708 SPTA1P02549 2419 aa14.82□□□□□ -0.04
USP39-205ENST00000442708 A0A0G2JND7 137 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 PRAMEF2O60811 474 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 SLC22A3O75751 556 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 GPC1P35052 558 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 HLCSP50747 726 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 NR0B1P51843 470 aaKnown RBP14.81□□□□□ -0.04
USP39-205ENST00000442708 CLNS1AP54105 237 aaKnown RBP14.81□□□□□ -0.04
USP39-205ENST00000442708 OR1C1Q15619 314 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 FAM174BQ3ZCQ3 159 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 PAOXQ6QHF9 649 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 WDR53Q7Z5U6 358 aaPredicted RBP14.81□□□□□ -0.04
USP39-205ENST00000442708 ZFP28Q8NHY6 868 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 OR5P2Q8WZ92 322 aa14.81□□□□□ -0.04
USP39-205ENST00000442708 PNPLA2Q96AD5 504 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms