RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 ACAD11Q709F0 780 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 SRRM1Q8IYB3 904 aaKnown RBP18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 ZNF615Q8N8J6 731 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 ZNF441Q8N8Z8 693 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 ADCY4Q8NFM4 1077 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 ASB5Q8WWX0 329 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 EXOSC8Q96B26 276 aaKnown RBP18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 IQCGQ9H095 443 aaKnown RBP18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 GSTO2Q9H4Y5 243 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 SH2D2AQ9NP31 389 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 ALKBH4Q9NXW9 302 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 TNFRSF10DQ9UBN6 386 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 GRID1Q9ULK0 1009 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 DLGAP4Q9Y2H0 992 aa18.26■□□□□ 0.51
SHROOM1-204ENST00000440118 FAM90A27PA6NNH2 459 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 FOXO6A8MYZ6 492 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 AQP7O14520 342 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 GPX3P22352 226 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 ACVR2AP27037 513 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 HEPACAMQ14CZ8 416 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 TOMM20Q15388 145 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 PRICKLE4Q2TBC4 344 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 GXYLT1Q4G148 440 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 FAM111BQ6SJ93 734 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 SCIMPQ6UWF3 145 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 TICAM1Q8IUC6 712 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 SAMD14Q8IZD0 417 aaPredicted RBP18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 OR10Q1Q8NGQ4 319 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 CHTF18Q8WVB6 975 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 ITPAQ9BY32 194 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 MAT2BQ9NZL9 334 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 PRODH2Q9UF12 536 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 MID2Q9UJV3 735 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 CES1P1Q9UKY3 287 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 CNOT11Q9UKZ1 510 aaKnown RBP18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 EMCNQ9ULC0 261 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 LRBAP50851 2863 aa18.25■□□□□ 0.51
SHROOM1-204ENST00000440118 H3BQF6 201 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 SUSD5O60279 629 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 HCN1O60741 890 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 CDH16O75309 829 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 TRAPPC6AO75865 159 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 PROCP04070 461 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 DRD2P14416 443 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 ABCD3P28288 659 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 TNFRSF8P28908 595 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 CHRNB4P30926 498 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 MRPS35P82673 323 aaKnown RBP18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 PLCXD2Q0VAA5 305 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 PMPCAQ10713 525 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 CDSNQ15517 529 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 LTB4RQ15722 352 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 ERCC6LQ2NKX8 1250 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 PACS2Q86VP3 889 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 MARVELD2Q8N4S9 558 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 C17orf47Q8NEP4 570 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 OR52R1Q8NGF1 315 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 RDH11Q8TC12 318 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.24■□□□□ 0.512e-7■■■■■ 58.1
SHROOM1-204ENST00000440118 ADIPOR1Q96A54 375 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 CNRIP1Q96F85 164 aaPredicted RBP18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 APIPQ96GX9 242 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 RILPQ96NA2 401 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 NXF5Q9H1B4 397 aaKnown RBP18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 METTL7AQ9H8H3 244 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 L2HGDHQ9H9P8 463 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 HEY2Q9UBP5 337 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 PLLPQ9Y342 182 aa18.24■□□□□ 0.51
SHROOM1-204ENST00000440118 INTS1Q8N201 2190 aaKnown RBP18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 ARHGAP21Q5T5U3 1957 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 C15orf38-AP3S2A0A0A6YYH1 394 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 LRRC3CA6NJW4 275 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 G3V2L1 256 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 ANXA4P09525 319 aaPredicted RBP18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 RFPL3SP0C7P2 107 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 PRF1P14222 555 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 KRT4P19013 534 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 NAGLUP54802 743 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 MAP4K2Q12851 820 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 BICRALQ6AI39 1079 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 B3GNT6Q6ZMB0 384 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 TDRPQ86YL5 185 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 C4orf33Q8N1A6 199 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 RPRMLQ8N4K4 120 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 SPPL2AQ8TCT8 520 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 LCORQ96JN0 433 aaPredicted RBP18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 SECISBP2Q96T21 854 aaKnown RBP18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 SLC6A15Q9H2J7 730 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 MIEF1Q9NQG6 463 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 QPCTLQ9NXS2 382 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 RNF6Q9Y252 685 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 DTX4Q9Y2E6 619 aa18.23■□□□□ 0.51
SHROOM1-204ENST00000440118 A0A1B0GVC2 190 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 TLDC2A0PJX2 215 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 C19orf84I3L1E1 186 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 PLIN3O60664 434 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 WDR1O75083 606 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 SNX4O95219 450 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 CPA3P15088 417 aa18.22■□□□□ 0.51
SHROOM1-204ENST00000440118 PCSK2P16519 638 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms