RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ANKK1Q8NFD2 765 aa8.58□□□□□ -1.04
COPB1-202ENST00000439561 OR2T35Q8NGX2 323 aa8.58□□□□□ -1.04
COPB1-202ENST00000439561 SPRYD4Q8WW59 207 aaPredicted RBP8.58□□□□□ -1.04
COPB1-202ENST00000439561 FAM46AQ96IP4 442 aaKnown RBP8.58□□□□□ -1.04
COPB1-202ENST00000439561 SLC35G5Q96KT7 338 aa8.58□□□□□ -1.04
COPB1-202ENST00000439561 THAP7Q9BT49 309 aaPredicted RBP8.58□□□□□ -1.04
COPB1-202ENST00000439561 RBCK1Q9BYM8 510 aa8.58□□□□□ -1.04
COPB1-202ENST00000439561 DPAGT1Q9H3H5 408 aa8.58□□□□□ -1.04
COPB1-202ENST00000439561 TNFRSF10DQ9UBN6 386 aa8.58□□□□□ -1.04
COPB1-202ENST00000439561 SESN1Q9Y6P5 492 aa8.58□□□□□ -1.04
COPB1-202ENST00000439561 DOCK3Q8IZD9 2030 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 BRWD3Q6RI45 1802 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 POM121CA8CG34 1229 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 CHST10O43529 356 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 SLC22A5O76082 557 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 SRPRAP08240 638 aaKnown RBP8.57□□□□□ -1.04
COPB1-202ENST00000439561 FURINP09958 794 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 MSL3P1P0C860 447 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 C8orf89P0DMQ9 161 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 UQCRC2P22695 453 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 GIFP27352 417 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 IFNGR2P38484 337 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 GPR4P46093 362 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 EPHB3P54753 998 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 TSPAN5P62079 268 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 RAE1P78406 368 aaKnown RBP8.57□□□□□ -1.04
COPB1-202ENST00000439561 SP140Q13342 867 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 PUM1Q14671 1186 aaKnown RBP eCLIP8.57□□□□□ -1.04
COPB1-202ENST00000439561 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.57□□□□□ -1.042e-6■■■■□ 19.8
COPB1-202ENST00000439561 GLYR1Q49A26 553 aaPredicted RBP8.57□□□□□ -1.04
COPB1-202ENST00000439561 ZNF697Q5TEC3 545 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 DEFB128Q7Z7B8 93 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 IZUMO1Q8IYV9 350 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 ZNF614Q8N883 585 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 WDR20Q8TBZ3 569 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 NARS2Q96I59 477 aaKnown RBP8.57□□□□□ -1.04
COPB1-202ENST00000439561 RNF170Q96K19 258 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 OR4K3Q96R72 315 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 ARHGAP39Q9C0H5 1083 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 ABCG4Q9H172 646 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 FOLH1BQ9HBA9 442 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 B3GAT2Q9NPZ5 323 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 SPATA6Q9NWH7 488 aaPredicted RBP8.57□□□□□ -1.04
COPB1-202ENST00000439561 PCM1Q15154 2024 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 GABRPO00591 440 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 SOCS5O75159 536 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 CLTBP09497 229 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 ELFN1P0C7U0 828 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 MPC1LP0DKB6 136 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 IMPA1P29218 277 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 NOS3P29474 1203 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 ACVR1BP36896 505 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 BTN1A1Q13410 526 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 GPR176Q14439 515 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 RAET1GQ6H3X3 334 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 BPHLQ86WA6 291 aaPredicted RBP8.57□□□□□ -1.04
COPB1-202ENST00000439561 IQCF2Q8IXL9 164 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 FTMTQ8N4E7 242 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 BTN2A2Q8WVV5 523 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 SORCS1Q8WY21 1168 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 TAPBPLQ9BX59 468 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 CACNG6Q9BXT2 260 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 OR2AG1Q9H205 316 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 OR51I1Q9H343 314 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 OSGEPL1Q9H4B0 414 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 SPG21Q9NZD8 308 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 YIPF1Q9Y548 306 aa8.57□□□□□ -1.04
COPB1-202ENST00000439561 ARID1BQ8NFD5 2236 aaPredicted RBP8.57□□□□□ -1.04
COPB1-202ENST00000439561 A0A0A6YYJ9 748 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.56□□□□□ -1.04
COPB1-202ENST00000439561 LEUTXA8MZ59 168 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 M0R233 179 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 PITPNM1O00562 1244 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 FFAR1O14842 300 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 MID1O15344 667 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 OR5F1O95221 314 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 CKBP12277 381 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 PRG2P13727 222 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 HSD3B1P14060 373 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 PCSK2P16519 638 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 MMP11P24347 488 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 HSD3B2P26439 372 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 SSR2P43308 183 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 FLT3LGP49771 235 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 AKR1D1P51857 326 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 DSC1Q08554 894 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 SFRP4Q6FHJ7 346 aaPredicted RBP8.56□□□□□ -1.04
COPB1-202ENST00000439561 C22orf39Q6P5X5 142 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 KRT78Q8N1N4 520 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 ZNF655Q8N720 491 aaPredicted RBP8.56□□□□□ -1.04
COPB1-202ENST00000439561 ZNF680Q8NEM1 530 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 CYB5D2Q8WUJ1 264 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 ZNF480Q8WV37 535 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 HMGB4Q8WW32 186 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 KLK6Q92876 244 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 WDFY2Q96P53 400 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 EFCAB11Q9BUY7 163 aa8.56□□□□□ -1.04
COPB1-202ENST00000439561 GTPBP2Q9BX10 602 aaKnown RBP8.56□□□□□ -1.04
COPB1-202ENST00000439561 ELAC1Q9H777 363 aaKnown RBP8.56□□□□□ -1.04
COPB1-202ENST00000439561 HCN3Q9P1Z3 774 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms