RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 UQCRC2P22695 453 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 PPIBP23284 216 aaKnown RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 CERS1P27544 350 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 BUD31P41223 144 aaPredicted RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 C21orf58P58505 322 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 MAP4K2Q12851 820 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 IL18R1Q13478 541 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 CAMK2BQ13554 666 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 RGS21Q2M5E4 152 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 FRMPD2BQ6IN97 320 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 TMEM107Q6UX40 140 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 UNC5DQ6UXZ4 953 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 PRSS48Q7RTY5 328 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 DNAJC22Q8N4W6 341 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 OR52E1Q8NGJ3 308 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 ZNF675Q8TD23 568 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 TPSD1Q9BZJ3 242 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 DCSTAMPQ9H295 470 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 PSORS1C1Q9UIG5 152 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 DAPK2Q9UIK4 370 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 CORO2BQ9UQ03 480 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 ENPP4Q9Y6X5 453 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 SPAG17Q6Q759 2223 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 A0A1W2PR48 441 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 LRIT2A6NDA9 550 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 CLDN25C9JDP6 229 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 CNOT3O75175 753 aaKnown RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 ENTPD6O75354 484 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 MFN2O95140 757 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 GABARAPO95166 117 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 KRT75O95678 551 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 PDGFBP01127 241 aaPredicted RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 DCNP07585 359 aaKnown RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 TGFBR2P37173 567 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 ACTR1BP42025 376 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 PCBP3P57721 371 aaKnown RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 ACTR1AP61163 376 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 OLR1P78380 273 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 EIF2B5Q13144 721 aaKnown RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 SRSF5Q13243 272 aaKnown RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 LTB4RQ15722 352 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 ARMCX4Q5H9R4 360 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 CRB2Q5IJ48 1285 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 OR4C11Q6IEV9 310 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 ZNF761Q86XN6 746 aaPredicted RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 FBXO15Q8NCQ5 510 aaPredicted RBP8.94□□□□□ -0.98
CUX1-206ENST00000437600 CHPT1Q8WUD6 406 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 SMPDL3AQ92484 453 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 TMEM203Q969S6 136 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 ITPKCQ96DU7 683 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 GPA33Q99795 319 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 ABCB10Q9NRK6 738 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 TMEM74BQ9NUR3 256 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 AHSPQ9NZD4 102 aa8.94□□□□□ -0.98
CUX1-206ENST00000437600 CNTRLQ7Z7A1 2325 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 ASPMQ8IZT6 3477 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 PRSS38A1L453 326 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 ZNF860A6NHJ4 632 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 KDM1AO60341 852 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 HMGN2P05204 90 aaKnown RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 GABRG2P18507 467 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 GTF2E2P29084 291 aaKnown RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 SOX3P41225 446 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 ZNF33BQ06732 778 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 PRDX1Q06830 199 aaKnown RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 BCL2A1Q16548 175 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 ZNF630Q2M218 657 aaPredicted RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 TRIM16LQ309B1 348 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 COLEC12Q5KU26 742 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 BPHLQ86WA6 291 aaPredicted RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 ARMC8Q8IUR7 673 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 KLHDC8AQ8IYD2 350 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 TCEANCQ8N8B7 351 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 GEMIN6Q8WXD5 167 aaKnown RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 ZNF566Q969W8 418 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 RGMAQ96B86 450 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 CNRIP1Q96F85 164 aaPredicted RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 BMFQ96LC9 184 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 BBS4Q96RK4 519 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 RHBGQ9H310 441 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 TCEAL2Q9H3H9 227 aaPredicted RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 TMEM38AQ9H6F2 299 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 LMAN1LQ9HAT1 526 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 EXOSC4Q9NPD3 245 aaKnown RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 SEMA3GQ9NS98 782 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 TVP23BQ9NYZ1 205 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 CYP8B1Q9UNU6 501 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 ANGPT4Q9Y264 503 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 GPR52Q9Y2T5 361 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 LINC00854A0A1B0GVQ3 168 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 FCMRO60667 390 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 MTRF1O75570 445 aaKnown RBP8.93□□□□□ -0.98
CUX1-206ENST00000437600 CH25HO95992 272 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 ANXA8P13928 327 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 PCDH1Q08174 1060 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 FADDQ13158 208 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 LRRC32Q14392 662 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 GPAT3Q53EU6 434 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 CLEC12AQ5QGZ9 265 aa8.93□□□□□ -0.98
CUX1-206ENST00000437600 B3GLCTQ6Y288 498 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms