RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	FCRL4	Q96PJ5	515 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	TEFM	Q96QE5	360 aa	Known RBP	5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	NDC1	Q9BTX1	674 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	TRMO	Q9BU70	441 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	SCNM1	Q9BWG6	230 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	GATA5	Q9BWX5	397 aa	Predicted RBP	5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	C1QTNF3	Q9BXJ4	246 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	TMEM120A	Q9BXJ8	343 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	TWSG1	Q9GZX9	223 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	RNF32	Q9H0A6	362 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	RHBG	Q9H310	441 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	NT5DC2	Q9H857	520 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	FAM60A	Q9NP50	221 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	MLXIPL	Q9NP71	852 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	FBXO8	Q9NRD0	319 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	TXLNG	Q9NUQ3	528 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	THAP1	Q9NVV9	213 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	OXSM	Q9NWU1	459 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	NDUFA13	Q9P0J0	144 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	BAIAP2L1	Q9UHR4	511 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	GPR160	Q9UJ42	338 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	PCTP	Q9UKL6	214 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	NAALAD2	Q9Y3Q0	740 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	NEUROG3	Q9Y4Z2	214 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	ASB1	Q9Y576	335 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	PCDHGA8	Q9Y5G5	932 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	KLK4	Q9Y5K2	254 aa		5.84	□□□□□ -1.47
ECHDC1-208	ENST00000436638	PTPRZ1	P23471	2315 aa	Predicted RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PCNX2	A6NKB5	2137 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	IGKV1-8	A0A0C4DH67	115 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LOC100506127	A0A0U1RQW1	187 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TRABD2B	A6NFA1	517 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TMEM114	B3SHH9	223 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638		H0YGG7	62 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TAF4	O00268	1085 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NPHS1	O60500	1241 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PRAMEF10	O60809	474 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CTSV	O60911	334 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SCRG1	O75711	98 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR4F21	O95013	312 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CHEK2	O96017	543 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KRT6A	P02538	564 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KRT6B	P04259	564 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SERPINE1	P05121	402 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ENO1	P06733	434 aa	Known RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KLK3	P07288	261 aa	Predicted RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ADRB1	P08588	477 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PRPS2	P11908	318 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FGF5	P12034	268 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	NR1D1	P20393	614 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	GSTM2	P28161	218 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SERPINB1	P30740	379 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TLX1	P31314	330 aa	Predicted RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	AHR	P35869	848 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SERPINB5	P36952	375 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ETV4	P43268	484 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KRT6C	P48668	564 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ARSF	P54793	590 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PRRX1	P54821	245 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	STXBP1	P61764	594 aa	Known RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SKP1	P63208	163 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	YBX1	P67809	324 aa	Known RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TGM3	Q08188	693 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SCRN3	Q0VDG4	424 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LCP2	Q13094	533 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	STX3	Q13277	289 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	DDX39B	Q13838	428 aa	Known RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	TRIM25	Q14258	630 aa	Known RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CHI3L2	Q15782	390 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZIC1	Q15915	447 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CDON	Q4KMG0	1287 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FAM76B	Q5HYJ3	339 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	WASHC2D	Q5SRD0	308 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	YOD1	Q5VVQ6	348 aa	Predicted RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FBXO42	Q6P3S6	717 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PGBD2	Q6P3X8	592 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ISLR2	Q6UXK2	745 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FJX1	Q86VR8	437 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF227	Q86WZ6	799 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MARCH9	Q86YJ5	346 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	KIRREL3	Q8IZU9	778 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	LILRA2	Q8N149	483 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CSNK1A1L	Q8N752	337 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF527	Q8NB42	609 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	FAM156A	Q8NDB6	213 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	HIPK4	Q8NE63	616 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR4F6	Q8NGB9	312 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	OR4K1	Q8NGD4	311 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SLC13A3	Q8WWT9	602 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SELENOM	Q8WWX9	145 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CIDEC	Q96AQ7	238 aa	Predicted RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF501	Q96CX3	271 aa	Predicted RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	SPACA9	Q96E40	222 aa	Predicted RBP	5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	WDR34	Q96EX3	536 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CLUHP3	Q96NS8	147 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	ZNF382	Q96SR6	550 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	PIP5K1A	Q99755	562 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CTRC	Q99895	268 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	CENPK	Q9BS16	269 aa		5.83	□□□□□ -1.48
ECHDC1-208	ENST00000436638	MECR	Q9BV79	373 aa		5.83	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms