RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 ETFAP13804 333 aa21.47■■□□□ 1.03
CPSF4-204ENST00000436336 MATN1P21941 496 aa21.47■■□□□ 1.03
CPSF4-204ENST00000436336 CD82P27701 267 aa21.47■■□□□ 1.03
CPSF4-204ENST00000436336 CASP9P55211 416 aa21.47■■□□□ 1.03
CPSF4-204ENST00000436336 TXNL4AP83876 142 aaKnown RBP21.47■■□□□ 1.03
CPSF4-204ENST00000436336 FXNQ16595 210 aa21.47■■□□□ 1.03
CPSF4-204ENST00000436336 PTRH1Q86Y79 214 aaKnown RBP21.47■■□□□ 1.03
CPSF4-204ENST00000436336 DOK4Q8TEW6 326 aa21.47■■□□□ 1.03
CPSF4-204ENST00000436336 PTPMT1Q8WUK0 201 aaPredicted RBP21.47■■□□□ 1.03
CPSF4-204ENST00000436336 MUC13Q9H3R2 512 aa21.47■■□□□ 1.03
CPSF4-204ENST00000436336 USP22Q9UPT9 525 aa21.47■■□□□ 1.03
CPSF4-204ENST00000436336 ELOVL7A1L3X0 281 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 COQ9O75208 318 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 TNFRSF21O75509 655 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 PSMG1O95456 288 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 CBX7O95931 251 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 S1PR1P21453 382 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 ANXA11P50995 505 aaKnown RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 OR4D2P58180 307 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 FUT7Q11130 342 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 TRAP1Q12931 704 aaKnown RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 ZNF267Q14586 743 aaPredicted RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 LASP1Q14847 261 aaKnown RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 C1orf146Q5VVC0 180 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 ERICH5Q6P6B1 374 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 LANCL3Q6ZV70 420 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 NLGN4XQ8N0W4 816 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 NLGN4YQ8NFZ3 816 aaPredicted RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 MIPOL1Q8TD10 442 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 PCDHAC1Q9H158 963 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 PADI2Q9Y2J8 665 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 CLCA3PQ9Y6N3 262 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 WDFY3Q8IZQ1 3526 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 CDRT15L2A8MXV6 281 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 STMND1H3BQB6 276 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 KLF7O75840 302 aaPredicted RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 TCN2P20062 427 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 PRIM2P49643 509 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 KHKP50053 298 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 PGDP52209 483 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 DSTNP60981 165 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 RPS26P62854 115 aaKnown RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 MS4A2Q01362 244 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 EXOSC7Q15024 291 aaKnown RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 FAAH2Q6GMR7 532 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 TMEM205Q6UW68 189 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 ANKRD37Q7Z713 158 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 MICU2Q8IYU8 434 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 HORMAD2Q8N7B1 307 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 ENDOVQ8N8Q3 282 aaKnown RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 SIMC1Q8NDZ2 872 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 OR2Y1Q8NGV0 311 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 OR14A16Q8NHC5 309 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 CT55Q8WUE5 264 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 DAZLQ92904 295 aaKnown RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 CNPPD1Q9BV87 410 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 ACTRT3Q9BYD9 372 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 SERHL2Q9H4I8 314 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 THUMPD1Q9NXG2 353 aaKnown RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 C19orf25Q9UFG5 118 aaPredicted RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 EGFL7Q9UHF1 273 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 FAF1Q9UNN5 650 aaPredicted RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 ERVK-19Q9WJR5 959 aa21.46■■□□□ 1.03
CPSF4-204ENST00000436336 PTRH2Q9Y3E5 179 aaKnown RBP21.46■■□□□ 1.03
CPSF4-204ENST00000436336 A8MUA0 341 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 BRINP1O60477 761 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 ADRM1Q16186 407 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 GCNT6Q5T4J0 391 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 MFSD12Q6NUT3 480 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 TNFAIP8L2Q6P589 184 aaPredicted RBP21.45■■□□□ 1.02
CPSF4-204ENST00000436336 ZCCHC12Q6PEW1 402 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 PTOV1Q86YD1 416 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 ZZZ3Q8IYH5 903 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 OR52R1Q8NGF1 315 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 FBXL20Q96IG2 436 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 ART5Q96L15 291 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 NRSN2Q9GZP1 204 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 OR51I1Q9H343 314 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 TMEM38AQ9H6F2 299 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 EQTNQ9NQ60 294 aa21.45■■□□□ 1.02
CPSF4-204ENST00000436336 H0YHG0 523 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 ACOT8O14734 319 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 RAD1O60671 282 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 STAMBPO95630 424 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 NUDT7P0C024 238 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 FOLR3P41439 243 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 RBBP4Q09028 425 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 VMACQ2NL98 169 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 OR7G1Q8NGA0 311 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 WDR60Q8WVS4 1066 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 C16orf58Q96GQ5 468 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 FAM117AQ9C073 453 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 BCAP29Q9UHQ4 241 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 MAGEL2Q9UJ55 1249 aa21.44■■□□□ 1.02
CPSF4-204ENST00000436336 IQCJ-SCHIP1C9J366 451 aaPredicted RBP21.43■■□□□ 1.02
CPSF4-204ENST00000436336 HRKO00198 91 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 HMGN4O00479 90 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 PCDH17O14917 1159 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 ASNA1O43681 348 aa21.43■■□□□ 1.02
CPSF4-204ENST00000436336 PRAMEF2O60811 474 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms