RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 BBS10Q8TAM1 723 aa13.02□□□□□ -0.32
SGMS1-203ENST00000429490 SETD6Q8TBK2 473 aa13.02□□□□□ -0.32
SGMS1-203ENST00000429490 ZCCHC10Q8TBK6 192 aa13.02□□□□□ -0.32
SGMS1-203ENST00000429490 GAL3ST1Q99999 423 aa13.02□□□□□ -0.32
SGMS1-203ENST00000429490 DPCDQ9BVM2 203 aaPredicted RBP13.02□□□□□ -0.32
SGMS1-203ENST00000429490 MVB12BQ9H7P6 319 aa13.02□□□□□ -0.32
SGMS1-203ENST00000429490 TMEM39AQ9NV64 488 aa13.02□□□□□ -0.32
SGMS1-203ENST00000429490 CCL26Q9Y258 94 aa13.02□□□□□ -0.32
SGMS1-203ENST00000429490 IRAK3Q9Y616 596 aa13.02□□□□□ -0.32
SGMS1-203ENST00000429490 ZNF646O15015 1829 aaPredicted RBP13.02□□□□□ -0.32
SGMS1-203ENST00000429490 H3BQ06 376 aaPredicted RBP13.02□□□□□ -0.33
SGMS1-203ENST00000429490 CA12O43570 354 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 GNSP15586 552 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 ZNF30P17039 623 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 SSTR2P30874 369 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 CENPAP49450 140 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 WDR5P61964 334 aaKnown RBP13.02□□□□□ -0.33
SGMS1-203ENST00000429490 MRPL58Q14197 206 aaKnown RBP13.02□□□□□ -0.33
SGMS1-203ENST00000429490 CDKL4Q5MAI5 379 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 ACSM5Q6NUN0 579 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 TMEM107Q6UX40 140 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 OVCA2Q8WZ82 227 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 DEFB118Q96PH6 123 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 IFT27Q9BW83 186 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 BRF2Q9HAW0 419 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 NEUROD4Q9HD90 331 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 TBC1D24Q9ULP9 559 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 A3GALT2U3KPV4 340 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 MYOFQ9NZM1 2061 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 TRIM64BA6NI03 449 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 SCN2BO60939 215 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 VNN2O95498 520 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 ELAVL4P26378 380 aaKnown RBP13.02□□□□□ -0.33
SGMS1-203ENST00000429490 ATP12AP54707 1039 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 LIM2P55344 173 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 PPP3R1P63098 170 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 MEDAGQ5VYS4 303 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 FCRLBQ6BAA4 426 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.02□□□□□ -0.33
SGMS1-203ENST00000429490 KREMEN2Q8NCW0 462 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 OR5P2Q8WZ92 322 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 SPNS1Q9H2V7 528 aa13.02□□□□□ -0.33
SGMS1-203ENST00000429490 SPATA6Q9NWH7 488 aaPredicted RBP13.02□□□□□ -0.33
SGMS1-203ENST00000429490 SEC16AO15027 2179 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 B4DXG7 233 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 UGDHO60701 494 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 TSPAN9O75954 239 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 SOD2P04179 222 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 CSF3P09919 207 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 RHAGQ02094 409 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 INSL4Q14641 139 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 P2RY14Q15391 338 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 CHMP1BQ7LBR1 199 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 TOMM5Q8N4H5 51 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 TMEM145Q8NBT3 493 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 WDR20Q8TBZ3 569 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 CHTF18Q8WVB6 975 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 AKAP1Q92667 903 aaKnown RBP eCLIP13.01□□□□□ -0.33
SGMS1-203ENST00000429490 NRTNQ99748 197 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 SAP130Q9H0E3 1048 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 C1GALT1Q9NS00 363 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 CUEDC1Q9NWM3 386 aaPredicted RBP13.01□□□□□ -0.33
SGMS1-203ENST00000429490 KCNK6Q9Y257 313 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 ZNF780BQ9Y6R6 833 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 NYNRINQ9P2P1 1898 aaKnown RBP13.01□□□□□ -0.33
SGMS1-203ENST00000429490 PDCD11Q14690 1871 aaKnown RBP13.01□□□□□ -0.33
SGMS1-203ENST00000429490 GFYI3L273 518 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 STX11O75558 287 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 RPN2P04844 631 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 ALPPP05187 535 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 SRPRAP08240 638 aaKnown RBP13.01□□□□□ -0.33
SGMS1-203ENST00000429490 HBQ1P09105 142 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 KELP23276 732 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 BLVRAP53004 296 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 LSM11P83369 360 aaKnown RBP eCLIP13.01□□□□□ -0.33
SGMS1-203ENST00000429490 CAMK1Q14012 370 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 TEAD2Q15562 447 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 CST9Q5W186 159 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 TCTN3Q6NUS6 607 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
SGMS1-203ENST00000429490 TRAM1L1Q8N609 369 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 KIAA1958Q8N8K9 716 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 KCT2Q8NC54 265 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 OR8K5Q8NH50 307 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 SUSD6Q92537 303 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 NUS1Q96E22 293 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 RC3H2Q9HBD1 1191 aaKnown RBP13.01□□□□□ -0.33
SGMS1-203ENST00000429490 MGAT4AQ9UM21 535 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 ATG2BQ96BY7 2078 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 TRBV5-4A0A0C4DH59 114 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 ZAR1LA6NP61 321 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 H0YC42 278 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 RFXAPO00287 272 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 INHAP05111 366 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 LAMP2P13473 410 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 NPPBP16860 134 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 CTGFP29279 349 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 ACSL1P33121 698 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 GCGRP47871 477 aa13.01□□□□□ -0.33
SGMS1-203ENST00000429490 CCR8P51685 355 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms