RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 SMIM24O75264 130 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 TRAPPC6AO75865 159 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 CBX7O95931 251 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 HPNP05981 417 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 CHN1P15882 459 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 PORP16435 677 aaPredicted RBP14.19□□□□□ -0.14
SEC13-210ENST00000428626 GCAP28676 217 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 DNAJA1P31689 397 aaKnown RBP14.19□□□□□ -0.14
SEC13-210ENST00000428626 CEACAM8P31997 349 aaPredicted RBP14.19□□□□□ -0.14
SEC13-210ENST00000428626 FEN1P39748 380 aaKnown RBP14.19□□□□□ -0.14
SEC13-210ENST00000428626 PTGDSP41222 190 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 MAPK12P53778 367 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 IFT88Q13099 833 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 LTB4RQ15722 352 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 TBCELQ5QJ74 424 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 CES4AQ5XG92 561 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 HLA-DQA1Q5Y7H0 255 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 ARSKQ6UWY0 536 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 ZZZ3Q8IYH5 903 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 LIX1Q8N485 282 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 ADCY4Q8NFM4 1077 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 HGDQ93099 445 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 C16orf45Q96MC5 204 aaPredicted RBP14.19□□□□□ -0.14
SEC13-210ENST00000428626 DOCK7Q96N67 2140 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 NODALQ96S42 347 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 MRPL57Q9BQC6 102 aaKnown RBP14.19□□□□□ -0.14
SEC13-210ENST00000428626 C1QTNF3Q9BXJ4 246 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 ITPAQ9BY32 194 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 B4GALT7Q9UBV7 327 aa14.19□□□□□ -0.14
SEC13-210ENST00000428626 C2orf72A6NCS6 295 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 GNB5O14775 395 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 NME6O75414 186 aaPredicted RBP14.18□□□□□ -0.14
SEC13-210ENST00000428626 ERAL1O75616 437 aaKnown RBP14.18□□□□□ -0.14
SEC13-210ENST00000428626 CTAG2O75638 210 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 URI1O94763 535 aaPredicted RBP14.18□□□□□ -0.14
SEC13-210ENST00000428626 OR4F21O95013 312 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 SNX4O95219 450 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 EPPINO95925 133 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 ATP1B1P05026 303 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 COL6A2P12110 1019 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 BMP7P18075 431 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 PTPN6P29350 595 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 SERPINB9P50453 376 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 ZNF136P52737 540 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 RIPPLY3P57055 190 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 MAP4K2Q12851 820 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 TSNAXIP1Q2TAA8 658 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 TRMT12Q53H54 448 aaKnown RBP14.18□□□□□ -0.14
SEC13-210ENST00000428626 WIPI1Q5MNZ9 446 aaPredicted RBP14.18□□□□□ -0.14
SEC13-210ENST00000428626 VASNQ6EMK4 673 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 VWA5B2Q8N398 1253 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 C1orf52Q8N6N3 182 aaKnown RBP14.18□□□□□ -0.14
SEC13-210ENST00000428626 C17orf47Q8NEP4 570 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 OR7G1Q8NGA0 311 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 TRPC4APQ8TEL6 797 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 SELENOMQ8WWX9 145 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 IFT81Q8WYA0 676 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 CTHRC1Q96CG8 243 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 CNRIP1Q96F85 164 aaPredicted RBP14.18□□□□□ -0.14
SEC13-210ENST00000428626 ZNF681Q96N22 645 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 SECISBP2Q96T21 854 aaKnown RBP14.18□□□□□ -0.14
SEC13-210ENST00000428626 UGT2B28Q9BY64 529 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 BRINP2Q9C0B6 783 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 PRDM14Q9GZV8 571 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 MRPL46Q9H2W6 279 aaKnown RBP14.18□□□□□ -0.14
SEC13-210ENST00000428626 ELOVL6Q9H5J4 265 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 ANKRA2Q9H9E1 313 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 RYDENQ9NUL5 291 aaKnown RBP14.18□□□□□ -0.14
SEC13-210ENST00000428626 EHD3Q9NZN3 535 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 CRIM1Q9NZV1 1036 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 HEY2Q9UBP5 337 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 MTRF1LQ9UGC7 380 aaKnown RBP14.18□□□□□ -0.14
SEC13-210ENST00000428626 ZNF180Q9UJW8 692 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 TMCO1Q9UM00 188 aa14.18□□□□□ -0.14
SEC13-210ENST00000428626 C1orf226A1L170 272 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 FAM221AA4D161 298 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 AHRRA9YTQ3 701 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 SYT5O00445 386 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 PPM1BO75688 479 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 ZWINTO95229 277 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 CTAGE8P0CG41 777 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 BMP5P22003 454 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 HSD17B3P37058 310 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 ART1P52961 327 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 IST1P53990 364 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 NAGLUP54802 743 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 MRPS35P82673 323 aaKnown RBP14.17□□□□□ -0.14
SEC13-210ENST00000428626 WHAMMP3Q1A5X7 153 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 UNC50Q53HI1 259 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 C10orf62Q5T681 223 aaPredicted RBP14.17□□□□□ -0.14
SEC13-210ENST00000428626 TIGD3Q6B0B8 471 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 PAGE2Q7Z2X7 111 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 CTAGE4Q8IX94 777 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 WDYHV1Q96HA8 205 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 TMEM41AQ96HV5 264 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 FMO2Q99518 471 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 GPATCH1Q9BRR8 931 aaKnown RBP14.17□□□□□ -0.14
SEC13-210ENST00000428626 GALNT9Q9HCQ5 603 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 AHSPQ9NZD4 102 aa14.17□□□□□ -0.14
SEC13-210ENST00000428626 TMEM216Q9P0N5 145 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms