RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 FAM43BQ6ZT52 329 aaPredicted RBP11.23□□□□□ -0.61
PTPRN-204ENST00000423636 DNAJC22Q8N4W6 341 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 NLGN4YQ8NFZ3 816 aaPredicted RBP11.23□□□□□ -0.61
PTPRN-204ENST00000423636 OR5P2Q8WZ92 322 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 CDS1Q92903 461 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 FAM46AQ96IP4 442 aaKnown RBP11.23□□□□□ -0.61
PTPRN-204ENST00000423636 EPYCQ99645 322 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 CNPPD1Q9BV87 410 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 DCSTAMPQ9H295 470 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 C8orf4Q9NR00 106 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 SACM1LQ9NTJ5 587 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 TBC1D23Q9NUY8 699 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 TRNAU1APQ9NX07 287 aaKnown RBP11.23□□□□□ -0.61
PTPRN-204ENST00000423636 DAPK2Q9UIK4 370 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 AP3M1Q9Y2T2 418 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 SLC2A10O95528 541 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 OCM2P0CE71 109 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 OCMP0CE72 109 aaPredicted RBP11.23□□□□□ -0.61
PTPRN-204ENST00000423636 PPIBP23284 216 aaKnown RBP11.23□□□□□ -0.61
PTPRN-204ENST00000423636 TRHRP34981 398 aaPredicted RBP11.23□□□□□ -0.61
PTPRN-204ENST00000423636 SERPINB10P48595 397 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 TPMTP51580 245 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 PDX1P52945 283 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 PCBP3P57721 371 aaKnown RBP11.23□□□□□ -0.61
PTPRN-204ENST00000423636 PCBP4P57723 403 aaKnown RBP11.23□□□□□ -0.61
PTPRN-204ENST00000423636 PROX2Q3B8N5 592 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 OR2G6Q5TZ20 316 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 SAXO2Q658L1 398 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 MSANTD1Q6ZTZ1 278 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 VN1R4Q7Z5H5 301 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 CAMKMTQ7Z624 323 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 NUP43Q8NFH3 380 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 OR52E4Q8NGH9 312 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 RAB7BQ96AH8 199 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 NEURL3Q96EH8 262 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 WDR34Q96EX3 536 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 SH3YL1Q96HL8 342 aaPredicted RBP11.23□□□□□ -0.61
PTPRN-204ENST00000423636 OR2M4Q96R27 311 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 C1QTNF2Q9BXJ5 285 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 CORO2BQ9UQ03 480 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 ENTPD4Q9Y227 616 aa11.23□□□□□ -0.61
PTPRN-204ENST00000423636 A8MU76 341 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 B4DGG1 531 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 MAN2B1O00754 1011 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 RGS5O15539 181 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 TBX1O43435 398 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 UGT2B17O75795 530 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 H1F0P07305 194 aaKnown RBP11.22□□□□□ -0.61
PTPRN-204ENST00000423636 ADORA3P0DMS8 318 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 PRG2P13727 222 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 CXCR2P25025 360 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 PPP2R1BP30154 601 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 NTSP30990 170 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 CRISP1P54107 249 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 C11orf91Q3C1V1 193 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 NKAIN4Q8IVV8 208 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 FAM83FQ8NEG4 500 aaPredicted RBP11.22□□□□□ -0.61
PTPRN-204ENST00000423636 OR7G2Q8NG99 324 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 RHOXF1Q8NHV9 184 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 FNDC8Q8TC99 324 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 HCAR2Q8TDS4 363 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 MAGEB10Q96LZ2 347 aaPredicted RBP11.22□□□□□ -0.61
PTPRN-204ENST00000423636 RDH12Q96NR8 316 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 QPCTLQ9NXS2 382 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 CD207Q9UJ71 328 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 TICRRQ7Z2Z1 1910 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 A0A0A6YYD5 115 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 SGK494L7N484 410 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 PRKYO43930 277 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 SERPINI2O75830 405 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 ZIC2O95409 532 aaPredicted RBP11.22□□□□□ -0.61
PTPRN-204ENST00000423636 CPMP14384 443 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 MMP11P24347 488 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 XKP51811 444 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 VSX2P58304 361 aaPredicted RBP11.22□□□□□ -0.61
PTPRN-204ENST00000423636 MAT1AQ00266 395 aaKnown RBP11.22□□□□□ -0.61
PTPRN-204ENST00000423636 KEAP1Q14145 624 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 ZNF311Q5JNZ3 666 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 SLC30A6Q6NXT4 461 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 FBXO42Q6P3S6 717 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 C16orf62Q7Z3J2 963 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 ZER1Q7Z7L7 766 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 GALNT12Q8IXK2 581 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 FBXO15Q8NCQ5 510 aaPredicted RBP11.22□□□□□ -0.61
PTPRN-204ENST00000423636 OR4K5Q8NGD3 323 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 ZNF420Q8TAQ5 688 aaPredicted RBP11.22□□□□□ -0.61
PTPRN-204ENST00000423636 DOK1Q99704 481 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 GPR174Q9BXC1 333 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 MSRAQ9UJ68 235 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 ACSL5Q9ULC5 683 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 CLCA3PQ9Y6N3 262 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 FANCMQ8IYD8 2048 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 ADH1BP00325 375 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 ITIH1P19827 911 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 SDHBP21912 280 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 CPN2P22792 545 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 PKLRP30613 574 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 FADDQ13158 208 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 LIPKQ5VXJ0 399 aa11.22□□□□□ -0.61
PTPRN-204ENST00000423636 LHFPL3Q86UP9 236 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms