RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 RXFP2Q8WXD0 754 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 SLC9A6Q92581 669 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 MRPL24Q96A35 216 aaKnown RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 APH1AQ96BI3 265 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 C18orf12Q96KH6 178 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 RBP7Q96R05 134 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 PHB2Q99623 299 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 TINAGL1Q9GZM7 467 aaPredicted RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 SLCO1C1Q9NYB5 712 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 COPS3Q9UNS2 423 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 TMED3Q9Y3Q3 217 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 CLIC4Q9Y696 253 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 MYO7BQ6PIF6 2116 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 MPDZO75970 2070 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 OR6C65A6NJZ3 312 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 SLITRK5O94991 958 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 OAS1P00973 400 aaKnown RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 RPS17P08708 135 aaKnown RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 AHCYP23526 432 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 LMO2P25791 158 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 FMO4P31512 558 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 PTPN7P35236 360 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 PTGIRP43119 386 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 ASMTP46597 345 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 CTXN1P60606 82 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 FAM189BP81408 668 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 MFAP5Q13361 173 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 ABRAXAS2Q15018 415 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF77Q15935 545 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 SLC9B1Q4ZJI4 515 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 MIDNQ504T8 468 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 C1orf220Q5T0J3 134 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 FCRLBQ6BAA4 426 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 OR7E24Q6IFN5 339 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 DHRS4L2Q6PKH6 230 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 B3GNT9Q6UX72 402 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 GPAT4Q86UL3 456 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 LACC1Q8IV20 430 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 CMIPQ8IY22 773 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 ZBTB2Q8N680 514 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 OR52L1Q8NGH7 329 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 FAM84AQ96KN4 292 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 TECTBQ96PL2 329 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 SOX7Q9BT81 388 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 PECRQ9BY49 303 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 ZBTB20Q9HC78 741 aaPredicted RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 DHRS7Q9Y394 339 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 ZFC3H1O60293 1989 aaKnown RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 MBLAC1A4D2B0 266 aaPredicted RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 HACD1B0YJ81 288 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF587BE7ETH6 402 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 HSPA12AO43301 675 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 HTRA2O43464 458 aaPredicted RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 HAUS5O94927 633 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 CPSF4O95639 269 aaKnown RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 KRT75O95678 551 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 APOC1P02654 83 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 F7P08709 466 aaPredicted RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 NR2F6P10588 404 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 IGFBP6P24592 240 aaPredicted RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 NPY1RP25929 384 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 APEX1P27695 318 aaKnown RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 GGT2P36268 569 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 VSNL1P62760 191 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 NR1D2Q14995 579 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 RCN1Q15293 331 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 PTPN20Q4JDL3 420 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 MTX3Q5HYI7 312 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 MANEALQ5VSG8 457 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 SLX4IPQ5VYV7 408 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 SLC6A19Q695T7 634 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 GALNTL5Q7Z4T8 443 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 VSTM4Q8IW00 320 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 ARHGAP12Q8IWW6 846 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 GALNT12Q8IXK2 581 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF619Q8N2I2 560 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 OR4F17Q8NGA8 305 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 SLC38A5Q8WUX1 472 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 OR4F4Q96R69 305 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 ZNF703Q9H7S9 590 aaPredicted RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 NOX4Q9NPH5 578 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 CA5BQ9Y2D0 317 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 C15orf41Q9Y2V0 281 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 AMDHD2Q9Y303 409 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 PCDHGA9Q9Y5G4 932 aaKnown RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 B3GALT1Q9Y5Z6 326 aa3.34□□□□□ -1.87
TOP2A-201ENST00000423485 GCN1Q92616 2671 aaKnown RBP3.34□□□□□ -1.87
TOP2A-201ENST00000423485 NCF1BA6NI72 391 aaPredicted RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 NCF1CA8MVU1 366 aaPredicted RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 K7EPI3 171 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 CTSVO60911 334 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 ATE1O95260 518 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 THY1P04216 161 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 RAB40ALP0C0E4 278 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 EBLN1P0CF75 366 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 NCF1P14598 390 aaPredicted RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 HOXB6P17509 224 aaKnown RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 ATF4P18848 351 aaPredicted RBP3.34□□□□□ -1.88
TOP2A-201ENST00000423485 EPHA1P21709 976 aa3.34□□□□□ -1.88
TOP2A-201ENST00000423485 CCNCP24863 283 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms