RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 B4DXG7 233 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 H0YIV9 168 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 OR7A17O14581 309 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 SNPHO15079 494 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 SMAD7O15105 426 aaKnown RBP7.37□□□□□ -1.23
VIM-202ENST00000421459 ICOSLGO75144 302 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 SNX4O95219 450 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 GFAPP14136 432 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 GPX3P22352 226 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 PIK3R1P27986 724 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 SERPINB1P30740 379 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 SPRP35270 261 aaPredicted RBP7.37□□□□□ -1.23
VIM-202ENST00000421459 OPRM1P35372 400 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 FEN1P39748 380 aaKnown RBP7.37□□□□□ -1.23
VIM-202ENST00000421459 PEX19P40855 299 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 GNG11P61952 73 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 FAM27E3Q08E93 113 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 FUT7Q11130 342 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 TBL3Q12788 808 aaKnown RBP7.37□□□□□ -1.23
VIM-202ENST00000421459 CBLBQ13191 982 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 BIKQ13323 160 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 LTB4RQ15722 352 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 SGO1Q5FBB7 561 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 NHSL2Q5HYW2 709 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 TBCELQ5QJ74 424 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 GRTP1Q5TC63 336 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 LIPJQ5W064 366 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 OR5M10Q6IEU7 315 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 TBC1D1Q86TI0 1168 aaPredicted RBP7.37□□□□□ -1.23
VIM-202ENST00000421459 CCDC25Q86WR0 208 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 KIF18BQ86Y91 864 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 TRIM42Q8IWZ5 723 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 PM20D2Q8IYS1 436 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 WDSUB1Q8N9V3 476 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 ADCY4Q8NFM4 1077 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 OR4K14Q8NGD5 310 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 OR52B6Q8NGF0 335 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 OR1J4Q8NGS1 313 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 ZPLD1Q8TCW7 415 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 FBF1Q8TES7 1133 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 CDKL2Q92772 493 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 ARSGQ96EG1 525 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 LRRC46Q96FV0 321 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 TMEM41AQ96HV5 264 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 NSUN5Q96P11 429 aaKnown RBP7.37□□□□□ -1.23
VIM-202ENST00000421459 PIGQQ9BRB3 760 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 CENPKQ9BS16 269 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 ITPAQ9BY32 194 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 MRPL1Q9BYD6 325 aaKnown RBP7.37□□□□□ -1.23
VIM-202ENST00000421459 NOL11Q9H8H0 719 aaKnown RBP7.37□□□□□ -1.23
VIM-202ENST00000421459 IPPKQ9H8X2 491 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 ANKRA2Q9H9E1 313 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 CALHM2Q9HA72 323 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 NMRAL1Q9HBL8 299 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 NEUROD4Q9HD90 331 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 FARSBQ9NSD9 589 aaKnown RBP7.37□□□□□ -1.23
VIM-202ENST00000421459 FOXD3Q9UJU5 478 aaPredicted RBP7.37□□□□□ -1.23
VIM-202ENST00000421459 EDARQ9UNE0 448 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 PCDHGA11Q9Y5H2 935 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 DNAJC13O75165 2243 aa7.37□□□□□ -1.23
VIM-202ENST00000421459 FBN1P35555 2871 aaKnown RBP7.37□□□□□ -1.23
VIM-202ENST00000421459 AKAP6Q13023 2319 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 FLNAP21333 2647 aaKnown RBP7.36□□□□□ -1.23
VIM-202ENST00000421459 TRIM64A6NGJ6 449 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 TRIM64BA6NI03 449 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 CAPN14A8MX76 684 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 H0Y3Z8 333 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 H7C1Q1 480 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 PPP6CO00743 305 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 ZSCAN12O43309 604 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 RAD51CO43502 376 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 UGT2B11O75310 529 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 ERN1O75460 977 aaKnown RBP7.36□□□□□ -1.23
VIM-202ENST00000421459 PPM1BO75688 479 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 RCBTB2O95199 551 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 TGM6O95932 706 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 C2P06681 752 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 CTAGE8P0CG41 777 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 CYP4B1P13584 511 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 TSPAN8P19075 237 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 PCSK6P29122 969 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 GALNSP34059 522 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 CPA2P48052 419 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 NRG3P56975 720 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 SORDQ00796 357 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 C2orf54Q08AI8 447 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 CUL3Q13618 768 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 GTF2H2Q13888 395 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 PRICKLE4Q2TBC4 344 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 TRMT12Q53H54 448 aaKnown RBP7.36□□□□□ -1.23
VIM-202ENST00000421459 MROH9Q5TGP6 573 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 OR52E8Q6IFG1 317 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 GTF2H2CQ6P1K8 395 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 C22orf34Q6ZV56 151 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 NUDT13Q86X67 352 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 CTAGE4Q8IX94 777 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 PLD6Q8N2A8 252 aaKnown RBP7.36□□□□□ -1.23
VIM-202ENST00000421459 L3MBTL4Q8NA19 623 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 OR14L1PQ8NHC6 308 aa7.36□□□□□ -1.23
VIM-202ENST00000421459 OMA1Q96E52 524 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms