RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 C3orf14Q9HBI5 128 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 SERHLQ9NQF3 203 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 C19orf53Q9UNZ5 99 aaPredicted RBP16.3■□□□□ 0.2
LINC00271-201ENST00000421378 NDUFAF1Q9Y375 327 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 ASPDHA6ND91 283 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 OR6C76A6NM76 312 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 COQ9O75208 318 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 SOX8P57073 446 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 ST3GAL2Q16842 350 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 SPDYE7PQ495Y7 208 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 JMJD6Q6NYC1 403 aaPredicted RBP16.3■□□□□ 0.2
LINC00271-201ENST00000421378 SLC2A7Q6PXP3 512 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 DNAJC14Q6Y2X3 702 aaPredicted RBP16.3■□□□□ 0.2
LINC00271-201ENST00000421378 TMEM64Q6YI46 380 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 SLC29A4Q7RTT9 530 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 C9orf40Q8IXQ3 194 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 ZNF615Q8N8J6 731 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 OR8K3Q8NH51 312 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 GOT1L1Q8NHS2 421 aaPredicted RBP16.3■□□□□ 0.2
LINC00271-201ENST00000421378 C16orf52Q8NHV5 167 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 BRIX1Q8TDN6 353 aaKnown RBP16.3■□□□□ 0.2
LINC00271-201ENST00000421378 FAM120BQ96EK7 910 aaKnown RBP16.3■□□□□ 0.2
LINC00271-201ENST00000421378 CRELD1Q96HD1 420 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 INPP5KQ9BT40 448 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 DEFB126Q9BYW3 111 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 ZCCHC3Q9NUD5 404 aaKnown RBP16.3■□□□□ 0.2
LINC00271-201ENST00000421378 ERVK-11Q9UQG0 969 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 CFL2Q9Y281 166 aa16.3■□□□□ 0.2
LINC00271-201ENST00000421378 EMC8O43402 210 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 ZFAND5O76080 213 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 ITGB2P05107 769 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 CDKN2CP42773 168 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 CCT3P49368 545 aaKnown RBP16.29■□□□□ 0.2
LINC00271-201ENST00000421378 CCL11P51671 97 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 RNF4P78317 190 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 DUSP8Q13202 625 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 TLR1Q15399 786 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 SNX32Q86XE0 403 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 TRIML2Q8N7C3 387 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 OR5AK3PQ8NH89 298 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 GTF2H4Q92759 462 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 MOAP1Q96BY2 351 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 MS4A4EQ96PG1 132 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 GAL3ST4Q96RP7 486 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 TRIM4Q9C037 500 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 NTMQ9P121 344 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 PRODH2Q9UF12 536 aa16.29■□□□□ 0.2
LINC00271-201ENST00000421378 LEF1Q9UJU2 399 aaPredicted RBP16.29■□□□□ 0.2
LINC00271-201ENST00000421378 DSPP15924 2871 aaKnown RBP16.28■□□□□ 0.2
LINC00271-201ENST00000421378 MED13Q9UHV7 2174 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 LOC100653049A0A140TA62 436 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 A6NL46 340 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 A8MUI8 341 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 PRKNO60260 465 aaPredicted RBP16.28■□□□□ 0.2
LINC00271-201ENST00000421378 KRT34O76011 436 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 PSMG1O95456 288 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 ANP32DO95626 131 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 EMDP50402 254 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 PRKAG1P54619 331 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 GAB1Q13480 694 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 CYLC2Q14093 348 aaPredicted RBP16.28■□□□□ 0.2
LINC00271-201ENST00000421378 EBPQ15125 230 aaKnown RBP16.28■□□□□ 0.2
LINC00271-201ENST00000421378 PAGE3Q5JUK9 113 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 BHLHB9Q6PI77 547 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 GPR155Q7Z3F1 870 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 TREML1Q86YW5 311 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 SLC5A8Q8N695 610 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 SIRT6Q8N6T7 355 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 NUP43Q8NFH3 380 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 OR56A1Q8NGH5 318 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 OR5L2Q8NGL0 311 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 RP9Q8TA86 221 aaKnown RBP16.28■□□□□ 0.2
LINC00271-201ENST00000421378 NUBPLQ8TB37 319 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 SFXN5Q8TD22 340 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 THAP3Q8WTV1 239 aaPredicted RBP16.28■□□□□ 0.2
LINC00271-201ENST00000421378 GPR83Q9NYM4 423 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 VPS4AQ9UN37 437 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 DTX4Q9Y2E6 619 aa16.28■□□□□ 0.2
LINC00271-201ENST00000421378 HEMK1Q9Y5R4 338 aaPredicted RBP16.28■□□□□ 0.2
LINC00271-201ENST00000421378 RNF103-CHMP3A0A140T963 221 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 C2orf92A0A1B0GVN3 265 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 BBIP1A8MTZ0 92 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 CAPN14A8MX76 684 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 GSNP06396 782 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 UQCRC2P22695 453 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 TRPC1P48995 793 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 CBX1P83916 185 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 TP53BP2Q13625 1128 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 RAPSNQ13702 412 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 MYBPC3Q14896 1274 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 MMEL1Q495T6 779 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 ZNF621Q6ZSS3 439 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 PSMF1Q92530 271 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 EXTL1Q92935 676 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 SLC35A5Q9BS91 424 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 WWTR1Q9GZV5 400 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 PRORYQ9H606 182 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 EQTNQ9NQ60 294 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 TEKT2Q9UIF3 430 aa16.27■□□□□ 0.2
LINC00271-201ENST00000421378 NUP214P35658 2090 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms