RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 SORBS2O94875 1100 aaKnown RBP13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 HMGN2P05204 90 aaKnown RBP13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 RAB40ALP0C0E4 278 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 JMJD7P0C870 316 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 ARAFP10398 606 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 MC3RP41968 323 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 PRIM2P49643 509 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 CCNIQ14094 377 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 GNA13Q14344 377 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 SPDYE7PQ495Y7 208 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 GCNT6Q5T4J0 391 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 INTS11Q5TA45 600 aaKnown RBP13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 TMEM164Q5U3C3 297 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 C1orf189Q5VU69 101 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 GLYATQ6IB77 296 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 CDC73Q6P1J9 531 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 ZFP1Q6P2D0 407 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 TMEM205Q6UW68 189 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 GALNT12Q8IXK2 581 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 VWA5B2Q8N398 1253 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 GALNT15Q8N3T1 639 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 METTL27Q8N6F8 245 aaPredicted RBP13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 CDRT4Q8N9R6 151 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 PMM1Q92871 262 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 PTCHD1Q96NR3 888 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 STACQ99469 402 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 SPSB2Q99619 263 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 ACTRT3Q9BYD9 372 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 ULBP3Q9BZM4 244 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 TRIM8Q9BZR9 551 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 VN1R1Q9GZP7 353 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 PCDHAC1Q9H158 963 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 DUSP22Q9NRW4 184 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 DDX18Q9NVP1 670 aaKnown RBP13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 IFT80Q9P2H3 777 aaPredicted RBP13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 ACSL6Q9UKU0 697 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 LIPT1Q9Y234 373 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 B3GALT1Q9Y5Z6 326 aa13.32□□□□□ -0.28
SHMT1P1-201ENST00000419974 IGF2RP11717 2491 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 A0A1W2PNU3 283 aaPredicted RBP13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 C9orf172C9J069 976 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 HMGN4O00479 90 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 DYRK3O43781 588 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 GMNNO75496 209 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 CAPNS1P04632 268 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 TFPTP0C1Z6 253 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 ZNF28P17035 718 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 TCN1P20061 433 aaPredicted RBP13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 MAOAP21397 527 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 NT5EP21589 574 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 MATN1P21941 496 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 CD82P27701 267 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 SOAT1P35610 550 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 CRATP43155 626 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 KHKP50053 298 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 POLE2P56282 527 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 PCBP3P57721 371 aaKnown RBP13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 DSTNP60981 165 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 PSPHP78330 225 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 ERV3-1Q14264 604 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 LTB4RQ15722 352 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 CYP51A1Q16850 503 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 VWA2Q5GFL6 755 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 COX20Q5RI15 118 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 HEPHL1Q6MZM0 1159 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 MFSD12Q6NUT3 480 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 FAM156AQ8NDB6 213 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 PAPD5Q8NDF8 572 aaKnown RBP13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 OR5AK3PQ8NH89 298 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 PTPMT1Q8WUK0 201 aaPredicted RBP13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 FBXL20Q96IG2 436 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 SLC35G5Q96KT7 338 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 ART5Q96L15 291 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 RNF145Q96MT1 663 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 DCLRE1BQ9H816 532 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 BCL2L10Q9HD36 194 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 CTSFQ9UBX1 484 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 FAF1Q9UNN5 650 aaPredicted RBP13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 SATB2Q9UPW6 733 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 PCDHGB3Q9Y5G1 929 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 ZFHX4Q86UP3 3567 aa13.31□□□□□ -0.28
SHMT1P1-201ENST00000419974 LOC102723996A0A087X1L8 192 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 TCRBV5S2A0A599 114 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 CXCR6O00574 342 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 ENTPD5O75356 428 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 JRKO75564 520 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 CREG1O75629 220 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 STK17BO94768 372 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 CBX7O95931 251 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 AK1P00568 194 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 C1QCP02747 245 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 IGKV3-11P04433 115 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 GPIP06744 558 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 ETFAP13804 333 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 ITIH1P19827 911 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 ETV5P41161 510 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 EFNA3P52797 238 aa13.3□□□□□ -0.28
SHMT1P1-201ENST00000419974 CDK6Q00534 326 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms