RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 PDZD3Q86UT5 571 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 C12orf40Q86WS4 652 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 TMEFF1Q8IYR6 380 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 CHCHD4Q8N4Q1 142 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 SUN3Q8TAQ9 357 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 RIT1Q92963 219 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 CRELD1Q96HD1 420 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 HSPA12BQ96MM6 686 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 RDH12Q96NR8 316 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 ASPNQ9BXN1 380 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 POLDIP3Q9BY77 421 aaKnown RBP12.56□□□□□ -0.4
BDNF-208ENST00000418212 MED28Q9H204 178 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 GPR83Q9NYM4 423 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 SCN1AP35498 2009 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 CDC40O60508 579 aaKnown RBP eCLIP12.56□□□□□ -0.4
BDNF-208ENST00000418212 RDH16O75452 317 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 GRPRP30550 384 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 GDI2P50395 445 aaKnown RBP12.56□□□□□ -0.4
BDNF-208ENST00000418212 RPA4Q13156 261 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 SLC5A12Q1EHB4 618 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 UGT3A2Q3SY77 523 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 MAVSQ7Z434 540 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 ANKFN1Q8N957 763 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 CYB561A3Q8NBI2 242 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 OR8J1Q8NGP2 316 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 ZDHHC1Q8WTX9 485 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 ARRDC3Q96B67 414 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 MND1Q9BWT6 205 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 CHIAQ9BZP6 476 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 NCDNQ9UBB6 729 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 NUMBLQ9Y6R0 609 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 ENPP4Q9Y6X5 453 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 RNF13O43567 381 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 SLC6A6P31641 620 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 POLR2IP36954 125 aaKnown RBP12.56□□□□□ -0.4
BDNF-208ENST00000418212 C6orf132Q5T0Z8 1188 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 SBSNQ6UWP8 590 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 NRMQ8IXM6 262 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 FAM217AQ8IXS0 508 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 OR2T33Q8NG76 320 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 HHIPL1Q96JK4 782 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 DEFB126Q9BYW3 111 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 PRODH2Q9UF12 536 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 IFT52Q9Y366 437 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 SLC1A7O00341 560 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 RBMXL2O75526 392 aaKnown RBP12.56□□□□□ -0.4
BDNF-208ENST00000418212 TACSTD2P09758 323 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 SLC2A2P11168 524 aaPredicted RBP12.56□□□□□ -0.4
BDNF-208ENST00000418212 NAT2P11245 290 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 BMP2P12643 396 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 HOXC13P31276 330 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 HBA1P69905 142 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 ARFRP1Q13795 201 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 FATE1Q969F0 183 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 LGALS12Q96DT0 336 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 C8orf33Q9H7E9 229 aaPredicted RBP12.56□□□□□ -0.4
BDNF-208ENST00000418212 CNIH4Q9P003 139 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 GRHPRQ9UBQ7 328 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 ZNF221Q9UK13 617 aa12.56□□□□□ -0.4
BDNF-208ENST00000418212 PRAMEF33A0A0G2JMD5 474 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 NPIPA5E9PKD4 350 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 LAMTOR5O43504 91 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 DUX1O43812 170 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 PRAMEF10O60809 474 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 CCNOP22674 350 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
BDNF-208ENST00000418212 ACVR1BP36896 505 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 TAP2Q03519 686 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 PLCXD2Q0VAA5 305 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 ZNF627Q7L945 461 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 ZNF101Q8IZC7 436 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 FANK1Q8TC84 345 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 CREB3L4Q8TEY5 395 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 PMM1Q92871 262 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 DSN1Q9H410 356 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 TM7SF3Q9NS93 570 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 ABI3Q9P2A4 366 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 FTSJ1Q9UET6 329 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 NPIPA1Q9UND3 350 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 A0A1B0GTW7 788 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 PEX12O00623 359 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 PRODHO43272 600 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 ZNF888P0CJ79 500 aaPredicted RBP12.55□□□□□ -0.4
BDNF-208ENST00000418212 DRD1P21728 446 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 IMPA1P29218 277 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 CTGFP29279 349 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 PRLHRP49683 370 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 DCDC1P59894 354 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 SPHARQ15513 63 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 CCNJQ5T5M9 372 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 GTF2IRD2BQ6EKJ0 949 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 TMEM225Q6GV28 225 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 GTF2IRD2Q86UP8 949 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 SLC22A16Q86VW1 577 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 ZSWIM9Q86XI8 627 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 PHOSPHO2Q8TCD6 241 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 NSMAFQ92636 917 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 TMCO6Q96DC7 493 aa12.55□□□□□ -0.4
BDNF-208ENST00000418212 FAM46AQ96IP4 442 aaKnown RBP12.55□□□□□ -0.4
BDNF-208ENST00000418212 WACQ9BTA9 647 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms